Details from NCBI annotation

Gene Symbol Nphp4
Gene Name nephronophthisis 4, transcript variant X1
Entrez Gene ID 101711630

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NPHP4 ENSCPOG00000001792 (Guinea pig)

Gene Details

nephronophthisis 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001621, Guinea pig)

Protein Percentage 83.87%
CDS Percentage 87.11%
Ka/Ks Ratio 0.18598 (Ka = 0.0849, Ks = 0.4564)

NPHP4 ENSG00000131697 (Human)

Gene Details

nephronophthisis 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000367398, Human)

Protein Percentage 78.84%
CDS Percentage 81.78%
Ka/Ks Ratio 0.15949 (Ka = 0.1203, Ks = 0.7542)

Nphp4 ENSMUSG00000039577 (Mouse)

Gene Details

nephronophthisis 4 (juvenile) homolog (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080128, Mouse)

Protein Percentage 77.24%
CDS Percentage 79.69%
Ka/Ks Ratio 0.13907 (Ka = 0.1329, Ks = 0.9553)

Nphp4 ENSRNOG00000011967 (Rat)

Gene Details

nephronophthisis 4 (Nphp4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063188, Rat)

Protein Percentage 77.06%
CDS Percentage 79.68%
Ka/Ks Ratio 0.14092 (Ka = 0.1348, Ks = 0.9563)

Genome Location

Sequence Coding sequence

Length: 4266 bp    Location: 5326961..5432162   Strand: +
>XM_004863743.1
ATGAGCGACTGGAACAGGATCTTTGCCCAAAATGTACTTGTCCCTCCACATCCGCAGAGAGCCCGGCAGCTTTTGAAGGAATCCATGGCCTTTCAGTGTGTCCTGAAGTGGCTCGATGGGCCGCTAATTAAGCAGGGGGCGCTGGAGGTGCTGTCGGAGGTCGAGTGCCACCTGCGAGTGTCTCTCTTCGACGTCACCTACCGACACTTCTTTGGGAGGACGTGGAAAACCATGGTGAAGCCGACCAGGCAGCTCTCTCAGCAGCCACCCAGGATCATCTTCAGGGAGCCCTTCTACTTTCACACGTCCTTAAACCACCCGAACATTGTGGCTGTGGTCGAAGTAGTCGCTGAAGGCAAGAAGCAGGACGGGAGCCCCCAGGCCTTGTCCTGCGGGTTTGGAATTCTCCGGATCTTCAGCAGCAGGCCAGACTCTCCGCCCTCTCCGTCCCAGGACCGACAGTTGAAGCTGTATCATGGCACCCCCAGAGCCCTCCTGCACCCGCTCCTCCAGGACCCCATAGAACAAAACAAGCACATGACCCTCATTGAGAACTGCAGCCTGCACTACACGCTGCGGCCCCACCCGGCCCTGGAGCCTGCCTTCCACCTCCTGCCCGAGAACCTGCTGGTGTCAGGTCTGCAGCCCATCCCCGGCCTCCTTCCGGCGCACGGCAACTCGGGTGATGCCCTCTGGAAGCCACGCCTTCAGAAGACCTCCACGTGGCACCTGGACGACATCTTCTTCTCCCTGTATCCCTCCCTCGAGAAGTTTGAGGAGGAGCTTCTGGAACTCCTTGCCCAGGACCACTCCCAGGAGGGAGGTGGCCTGCTGGACGGTGGCCCCCTGGGGGTCCTGGAGCGACGCCTGCACGTGGGCGTGCACAACGGTCTGGGCTTCGTGCAGAGGCCGCAGGTGGTGGTGCTGATGCCCGAGATGGACATGGCCTTGACGCGCTCCGCCAGCTTCAGCAGGAAAGTCAGCTCCTCTTCCAGAACCAGCTCTGGAAATCAGGCTCTGGTTTTGAGAAGCCGCCTGCGCCTCGCCGAGATGGTCAGTCACCCTGCCTTTGCCATCACCTTTCAGCTGGAGTACGTGTTCAGCAGCCCTTCAGGAGTGGACAGCAACGCTGTGTCGCTCACTGCCTTGTCCCACTTGGCGTGCATGCGCATGGTCCGCTGGGCTGTCTGGAGCCCCGACCTGGAAGCCAGTGACGGCAGGGTCTCCTTGCCTCTGCAGGGTGGCACTGGGCCCAGCCCCTCGCGCTGCCTGGTCTACAAGGTGCCCTCGGACAGCAGGAGCTCTGAAGAGGTGAAGCAGACCGAGGTGGGGACGGTGCAGTTCCGGTTCTCGCTGAGCCCGGAGGAGCTGCCAGAGACCCCCAAGGAACGTGCCGAAGGCCCCCGGGCGGAGCAGCGGCCCTGCGGGAGGCCGCCCCGGTCCCCCTCAGGCCCACCAGCACCGACGCCCCAGGGTCTTGCTGCCACCCAGAACTCTCCCGTGGGACCAGGGTTGTCACTGTCCCAGCTGGCGGCCTCCCCACTGTCCCCAGCTCAGCGTCATTCAGCCAGAGTGAGTCCACAGCCACTGGACGGTTCCCAGCCCCAGACAGAGGACTTCCCGCTGGAGGGCAGGATCTCGCACCTGGAAGCTGACCTGAGCCGGACTCCTGCCTCCCTGGAAACCTCTGTCACCGAACACTTACAGGAGCTGCCGTTCACCCCGCTGCACGCCCCCATTGTGGTGGGAGCCCAGACCAGGAGCTCTGGAGGCCAGCTCTCGAGGGCCACCATGGCTGTCCTGCAGTCCTCCGGCTTCCCGGAGATTCTGGACACCAACAAGCAGCCCGCAGAAGCCGTCAGCCCCACAGAGCCCGTGGAGTTCAACCCGCAGAAGGAAGAGGCAGATCGTCTGCAGAGCAACGAGATGGTGCTGCACTTCTTGGCCTTCAGCAGAGTGGCCCAGGACTACCAAGGAACACCGTGGCCAAAGACTGTGTATTTCACCTTCCAGTTCTACCGCTTCCCACCCGTGACCACGCCGCGCCTGCAGCTGGTCCCACTGGACAGGGCTGGGGGGCCCAGCTCCGCCTCCCTGTCCCACCTCCTCGTTCCCATCAGTAAAGACGGCTCCTATGACACAGGGCCCCCAGGCTTGCAGCTGAGGTATGCAGTGGGCCCCGAGTTCCTGAAGCCAGGCGAGCAGCGCTGGTTCCTCCGCTACCTGGCCGTGCACACGTTGCAGATCGACGTCTGGGACGGGGATTCGCTGCTCCTTCTTGGATCGGCCGCTGTCCCAATGAAGCACCTCCTCCGCCAAGGCCGGCCAGCCGTGCAGGTTGCCCACCAGCTGGAAGTCGTGGCCACCGAGTATGAGCAGGACACCCCGGTGTCTGGGTTCGGCAGTGTCAAGCCCATCGGGGTCCACACGGTGGTGCAGGGCCGGCTGCATCTGACCTTGGCCAACGTGGGTCACGCATGTGAACGCAGAGCGAAAGAATCCTGCTCGCTGCCACCGTCCAGATCTCGGGTCATCTCGAACGACGGAGCCAGCCGCTTCCCTGGGGGCAGCCTCCTCACGCTGGGAAGCCAGAGACGGAGGAACGTGGTCCAGGCGCAGAGGCTGGCCGACGTGGACAGCGAGCTGGCCGCCATGCTGCTGACCCCTGCGCTGGGCGGCCGGGGACCCTGGAGCAGCGGCCGCGAGGTGGACGCTGTGCGCAGGCGAAAGCTGGAGAGGATGCGGTCTGTGCGCCTGCAGGAGTCGGGGGCGGAGCCCGTCAGCCGCAGGACGGCCGTGCTGGCCCAGCAGAGCGCGCGTATGCAGCACTCCCGGGACCTGCAGGTCATCGACGCCTACCGGGAGCGCACCAAGGCGGAGAGCATCGCCAGCCTGCTGAGCCTGGCCATCACCACGCAGCACACGCTCTACGCCACGCTGGGCACGGCCGAGTTCTTTGAGTTCGCCCTGAAAAACCCCCACAACACGCAGCACACGGTGTCCATCGAGATCGACAACCCCGAGCTCAGCCTCATCCTGGACAGCCGGGAGTGGAGGTACTTCAAAGACGCCGCCGGCCTGCACACGCCGCTGGAGGAGGACGTGTTCCACCTGCGCGGCGACCTCACCCCCCAGCTCTACCTGCGCCCCCGGGAGACCGTCCACGTCCCCTTCAAGTACCAGAGCTTCTCCGTGGGCCCACCAGAGCTGGCACAGGCCTCCACCGAGCTGAGGGCCGAGCGGGGCAGGGATGCTGGAGCACCCTGGAAGTCTGGTGCCACGCCCACTAAACATGCCAAGGTCCTGTTCCGCGTGAGTGGCGGCAAGCCCCTGGCCGTGCTCTGCCTGACTGTGGAGCCCCAGCCCCACATGGTGAACCAGGTCTTCCGCTTCTACCACCCGGAGCTCACCTTCCTGAAGAAGGCCATCCGCCTGCCTCCCTGGCACACCCTTCCAGGAGCTCCTGTGGGAAGACCAGGGGAGGAGCCAGCAGTCCACGTGCGGTGCAGCGACCCAAATGTCATCTGCGAGGCCCAGAATGTGGGCCCCAGGGAACCCCGGGATGTGTTTCTGAAGGTGGCCAGTGGTCCCAGCCCCGAGATCAAAGACTTCTTTGTTACCATTTATGCGGATCGCTGGCTGGCGGCACCCGTGCAGACGTGGCAGGTCTGCCTCCACTCCCTGCAGCGTGTGGATGTCTCCTGCGTCGCGGGCCAGGTGACTCGCCTGTCCCTTGTCCTCCGGGGGACGCAGACTGTCAGGAAAGTGAGAGCCTTCGCCTCCCACCCCCAGGAGCTGAAGATGGACCCTGCAGGTGACTTCCTGCTGCCCCCCCATGGGGTGCAGGACCTGCATGTGGGCGTGCAGCCCCGCAGGGCTGGCAGCCGCTTCGTGCGCCTCAACCTGGTTGATGTGGACTTCCACCAGCTGGTGGCTTCCTGGCTCCTGTGCCTCTCCTGTCGCCAGCCACTCATTTCCAAGGCCTTCGAGATCACCATGGCAGTGGGGGAAGGGAAGGGCGCTAACAAGCGGATCACCTACACCAACCCCTACCCGACCCCGAGGGCCTACCGCCTGCACAGCGACCGCCCGGACCTGCTGGAGTTCAGGGAGGATGCCTTCCAGGTGGGGGGCGGAGAGACCTACACCATCGGCCTGCGGTTCTCCCCAGGTGGGAGGCCGGGGCAAGAAGAGATCCTGATCTATATCAACGACCATGAAGACAAGAACGAAGAGACCTTTTGCGTGAAGGTCACCTACCAGTGA

Related Sequences

XP_004863800.1 Protein

Nphp4 PREDICTED: nephrocystin-4 isoform X1 [Heterocephalus glaber]

Length: 1421 aa      View alignments
>XP_004863800.1
MSDWNRIFAQNVLVPPHPQRARQLLKESMAFQCVLKWLDGPLIKQGALEVLSEVECHLRVSLFDVTYRHFFGRTWKTMVKPTRQLSQQPPRIIFREPFYFHTSLNHPNIVAVVEVVAEGKKQDGSPQALSCGFGILRIFSSRPDSPPSPSQDRQLKLYHGTPRALLHPLLQDPIEQNKHMTLIENCSLHYTLRPHPALEPAFHLLPENLLVSGLQPIPGLLPAHGNSGDALWKPRLQKTSTWHLDDIFFSLYPSLEKFEEELLELLAQDHSQEGGGLLDGGPLGVLERRLHVGVHNGLGFVQRPQVVVLMPEMDMALTRSASFSRKVSSSSRTSSGNQALVLRSRLRLAEMVSHPAFAITFQLEYVFSSPSGVDSNAVSLTALSHLACMRMVRWAVWSPDLEASDGRVSLPLQGGTGPSPSRCLVYKVPSDSRSSEEVKQTEVGTVQFRFSLSPEELPETPKERAEGPRAEQRPCGRPPRSPSGPPAPTPQGLAATQNSPVGPGLSLSQLAASPLSPAQRHSARVSPQPLDGSQPQTEDFPLEGRISHLEADLSRTPASLETSVTEHLQELPFTPLHAPIVVGAQTRSSGGQLSRATMAVLQSSGFPEILDTNKQPAEAVSPTEPVEFNPQKEEADRLQSNEMVLHFLAFSRVAQDYQGTPWPKTVYFTFQFYRFPPVTTPRLQLVPLDRAGGPSSASLSHLLVPISKDGSYDTGPPGLQLRYAVGPEFLKPGEQRWFLRYLAVHTLQIDVWDGDSLLLLGSAAVPMKHLLRQGRPAVQVAHQLEVVATEYEQDTPVSGFGSVKPIGVHTVVQGRLHLTLANVGHACERRAKESCSLPPSRSRVISNDGASRFPGGSLLTLGSQRRRNVVQAQRLADVDSELAAMLLTPALGGRGPWSSGREVDAVRRRKLERMRSVRLQESGAEPVSRRTAVLAQQSARMQHSRDLQVIDAYRERTKAESIASLLSLAITTQHTLYATLGTAEFFEFALKNPHNTQHTVSIEIDNPELSLILDSREWRYFKDAAGLHTPLEEDVFHLRGDLTPQLYLRPRETVHVPFKYQSFSVGPPELAQASTELRAERGRDAGAPWKSGATPTKHAKVLFRVSGGKPLAVLCLTVEPQPHMVNQVFRFYHPELTFLKKAIRLPPWHTLPGAPVGRPGEEPAVHVRCSDPNVICEAQNVGPREPRDVFLKVASGPSPEIKDFFVTIYADRWLAAPVQTWQVCLHSLQRVDVSCVAGQVTRLSLVLRGTQTVRKVRAFASHPQELKMDPAGDFLLPPHGVQDLHVGVQPRRAGSRFVRLNLVDVDFHQLVASWLLCLSCRQPLISKAFEITMAVGEGKGANKRITYTNPYPTPRAYRLHSDRPDLLEFREDAFQVGGGETYTIGLRFSPGGRPGQEEILIYINDHEDKNEETFCVKVTYQ