Details from NCBI annotation

Gene Symbol Phf13
Gene Name PHD finger protein 13, transcript variant X1
Entrez Gene ID 101699788

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHF13 ENSCPOG00000026032 (Guinea pig)

Gene Details

PHD finger protein 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017009, Guinea pig)

Protein Percentage 89.8%
CDS Percentage 87.39%
Ka/Ks Ratio 0.08268 (Ka = 0.0548, Ks = 0.6628)

PHF13 ENSG00000116273 (Human)

Gene Details

PHD finger protein 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000366876, Human)

Protein Percentage 91.67%
CDS Percentage 86.67%
Ka/Ks Ratio 0.06711 (Ka = 0.0477, Ks = 0.7109)

Phf13 ENSMUSG00000047777 (Mouse)

Gene Details

PHD finger protein 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062590, Mouse)

Protein Percentage 87.16%
CDS Percentage 84.01%
Ka/Ks Ratio 0.07715 (Ka = 0.0695, Ks = 0.9009)

Phf13 ENSRNOG00000009046 (Rat)

Gene Details

PHD finger protein 13 (Phf13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012407, Rat)

Protein Percentage 87.84%
CDS Percentage 83.22%
Ka/Ks Ratio 0.06996 (Ka = 0.0682, Ks = 0.9751)

Genome Location

Sequence Coding sequence

Length: 948 bp    Location: 4919360..4913214   Strand: -
>XM_004863703.1
ATGGTAACAGCTCAGCTCCGGCGGTGTTTGTTGTCCCAGGCAGGAGCCTCCCTTCACACTGACCCCTTCTCTCCATCACAGGAGTACTCCCCCAGCTACAAGAGGCGCAGGACCGTGGAGGACTTCAACAAGTTCTGCACTTTCGTCTTGGCTTATGCTGGCTACATCCCATACCCGAAGGAGGAGCTCCCTCTGAGGAGCAGCCCCAGCCCTGCCAACAGCACCGCGGGCACTATTGATAGTGACGGCTGGGATGCAGGTTTCACCGACATCGCGTCCTCCGTGCCCCTGCCAGTGTCCGACCGCTGCTTTAGCCATCTGCAGCCCACCCTCCTGCAGCGGGCAAAGCCCAGCAACTTCCTGCTAGACAGAAAGAAGACAGATAAACTGAAGAAGAAGAAGAAGAGGAAGCGAAGGGACAGCGATGTCCCGGTGAAGGAGGCCTACCGAGGGGGCGTGCTGAAGCTGGAGGCTGCAGACCCATACTCTGAGACCCCCGAGAGCCCCGCCCTGCAGGGTCTGCCCCAAGCCCCCAGCGAGCCCTGCTCAGGCTGGGACTCCGACACTCCCTCGAGTGGCTCTTGTGCCACCACTGTGTCACCCGATCAGGTCAAAGAAATAAAACCTGAAGGCAAACGGACTATTGTCCGGCAGGGGAAGCAGGTGGTGTTCCGGGACGAGGACAGCACTGGCAACGATGAGGACATTATGGTGGACTCAGATGACGATTCCTGGGACCTAGTCACCTGCTTCTGCATGAAGCCATTTGCGGGCCGTCCCATGATAGAGTGTAACGAGTGCCACACCTGGATTCACCTGTCCTGTGCGAAGATCCGGAAGTCCAACGTTCCGGAAGTGTTCGTCTGCCAAAAGTGCCGGGACTCCAAGTTTGACATCCGCCGTTCCAACCGCTCCCGAATGGGCTCCCGCAAGCTGTTTCTGGACTGA

Related Sequences

XP_004863760.1 Protein

Phf13 PREDICTED: PHD finger protein 13 isoform X1 [Heterocephalus glaber]

Length: 315 aa      View alignments
>XP_004863760.1
MVTAQLRRCLLSQAGASLHTDPFSPSQEYSPSYKRRRTVEDFNKFCTFVLAYAGYIPYPKEELPLRSSPSPANSTAGTIDSDGWDAGFTDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDVPVKEAYRGGVLKLEAADPYSETPESPALQGLPQAPSEPCSGWDSDTPSSGSCATTVSPDQVKEIKPEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSDDDSWDLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRMGSRKLFLD