Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101715753

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GRN ENSCPOG00000008789 (Guinea pig)

Gene Details

granulin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007890, Guinea pig)

Protein Percentage 70.54%
CDS Percentage 78.57%
Ka/Ks Ratio 0.23211 (Ka = 0.1766, Ks = 0.7608)

GRN ENSG00000030582 (Human)

Gene Details

granulin

External Links

Gene Match (Ensembl Protein ID: ENSP00000053867, Human)

Protein Percentage 69.85%
CDS Percentage 76.66%
Ka/Ks Ratio 0.2017 (Ka = 0.1864, Ks = 0.9243)

Grn ENSMUSG00000034708 (Mouse)

Gene Details

granulin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046340, Mouse)

Protein Percentage 64.38%
CDS Percentage 69.69%
Ka/Ks Ratio 0.17681 (Ka = 0.2537, Ks = 1.4349)

Grn ENSRNOG00000021031 (Rat)

Gene Details

granulin (Grn), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028557, Rat)

Protein Percentage 65.92%
CDS Percentage 70.72%
Ka/Ks Ratio 0.15385 (Ka = 0.2366, Ks = 1.5381)

Genome Location

Sequence Coding sequence

Length: 1767 bp    Location: 707228..704170   Strand: -
>XM_004859214.1
ATGTGGACCCTGGTGGGCTGGGCCACCTTGGTGGCGGGGCTGGTGGCTGGAACACGGTGCCCAGATGGTCGGGTCTGCCCAGTGGCCTGCTGCCCAGGTCCAGGAGGAGCTGGCTACAGCTGCTGTGACCCAGAAGTGGACACGTGGCCCACAACCCTGAGTGGGCACCTGGGCAGCCCCTGCCAGAGCTCCGAGCACTGCTCCACCGGGCACTCTTGTGTCTTCAACGCCTTGGGGACTTCCAGTTGCTGCCCATTCTCACAGGCTGAGGTGTGTGGGGATGGCCGCCACTGCTGTCCCCGAGGCTTCTCCTGCAGCGCCGATGGATGGACCTGCATCCGAAGACCAGGGGACCACCTGCTGGGTGCTGTCCAGTGCCCAGGTGGCGAGTTCCAGTGCCCCGAATCCTGTACATGCTGCCGCATGCCCGACGGCTCCTGGGGGTGCTGCCCCTTGCCTGAGGCATCCTGCCGTGAGGACAGGGTACACTGCTGTGCCCATGGGGCCTCCCGTGACCTGGTGCACACCTGCGGCATCATGCCCNACGGCACCCAGCCCCTGGCCAGGAAGGTCCCTGCCCAGAGGATGGAGTGGACAGCGGCCCTGCCCAGATCAGTCGTGTGCCCCGACAAGCGGTCCCAGTGTCCCGACAGTACCACCTGTTGCCAGCTGCCCAGTGGGGAGTACGGCTGCTGCCCAATGCCCAGCGCCATCTGCTGCTCCGACCACCTGCACTGCTGCCCCCAGGACACTGTGTGCGACCTGAAGCAGAGCAAGTGCCTGTCCCGGGAGAAGGCCACGGCCCTGCTCCCCATGCTGCCCTCCTGGACAGTGGGGGACGTGGAGTGTGACCAGGAGGTGAGCTGCCCGGACGGCTACACATGCTGCCGCCTGCAGTCAGGGGCCTGGGGCTGCTGCCCTTTCACAAAGGCTGTGTGCTGTGAGGACCGCGTGCACTGCTGCCCTGAGGGATTCACGTGCCACATGGAGAAGGGGACGTGTGAGCAGGGCGTGCTCCAGGTGCCCTGGGCGTGGAAGACCCCAGCCGGCCCCAGTCCGCCAAAGAGTGGCGATGTCCCCTGCGGCATGTTCACCAGCTGCCCCCCAGGCAACACCTGCTGCCGCGTCGCCTCTGGGGGATGGGGCTGCTGTCCCACCCCGGAGGCTGTCTGCTGCTCCAAGCATGAGCACTGCTGTCCCCAGGGTTACCTGTGCACAGCCGAGGGGCAGTGTCAGATGGACAGGCCGGGGGTGGGCATGGAAAAGACGCCCGCCCACCCGCTGTCCCTGGCCCGCGTGGGCGACCTCGGCTGTGACCAGCACACCAGCTGCCCGGTGGGCCAGACCTGCTGCCCCAGCCTGGGCGGGGGCTGGGCCTGTTGCCAGCTGCCACATGCCGTGTGCTGTGAGGACCGCCAGCACTGCTGCCCGGCGGGTTACACTTGCAACGTGAAGGCCCGGTCCTGCGAGAAGGGGCTGGACGCTGCCCACCCGGCTGCCCGCCTGGGCCTGCACTCCGCCAGCAGGGTGACCGACGTGGCGTGCGGGGACGGCCGCTTCTGCCGTGACGAGCAGACCTGCTGTCGAGACAGCCAGGGGCGCTGGGCCTGCTGCCCCTTCCGCCAGGGCTTCTGCTGCGTGGACCGGCGCCACTGCTGTCCTTTCGGTTTCCGATGTGCAGGCCGCGGAACCAAATGCGTCCGCAGGAAGACAGTGCTGCGATGGGACAGCCCGGCGTGGGGCCCTGCTCCGAGACTGCTGCTGTGA

Related Sequences

XP_004859271.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: granulins [Heterocephalus glaber]

Length: 588 aa      View alignments
>XP_004859271.1
MWTLVGWATLVAGLVAGTRCPDGRVCPVACCPGPGGAGYSCCDPEVDTWPTTLSGHLGSPCQSSEHCSTGHSCVFNALGTSSCCPFSQAEVCGDGRHCCPRGFSCSADGWTCIRRPGDHLLGAVQCPGGEFQCPESCTCCRMPDGSWGCCPLPEASCREDRVHCCAHGASRDLVHTCGIMPXGTQPLARKVPAQRMEWTAALPRSVVCPDKRSQCPDSTTCCQLPSGEYGCCPMPSAICCSDHLHCCPQDTVCDLKQSKCLSREKATALLPMLPSWTVGDVECDQEVSCPDGYTCCRLQSGAWGCCPFTKAVCCEDRVHCCPEGFTCHMEKGTCEQGVLQVPWAWKTPAGPSPPKSGDVPCGMFTSCPPGNTCCRVASGGWGCCPTPEAVCCSKHEHCCPQGYLCTAEGQCQMDRPGVGMEKTPAHPLSLARVGDLGCDQHTSCPVGQTCCPSLGGGWACCQLPHAVCCEDRQHCCPAGYTCNVKARSCEKGLDAAHPAARLGLHSASRVTDVACGDGRFCRDEQTCCRDSQGRWACCPFRQGFCCVDRRHCCPFGFRCAGRGTKCVRRKTVLRWDSPAWGPAPRLLL