Details from NCBI annotation

Gene Symbol Hmgb1
Gene Name high mobility group box 1
Entrez Gene ID 101705428

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624776.1 (Scaffold)

For more information consult the page for NW_004624776.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000007538 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020089, Guinea pig)

Protein Percentage 99.53%
CDS Percentage 96.57%
Ka/Ks Ratio 0.01551 (Ka = 0.0021, Ks = 0.1368)

HMGB1 ENSG00000189403 (Human)

Gene Details

high mobility group box 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000384678, Human)

Protein Percentage 100.0%
CDS Percentage 94.42%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.327)

Hmgb1 ENSMUSG00000066551 (Mouse)

Gene Details

high mobility group box 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000082682, Mouse)

Protein Percentage 99.07%
CDS Percentage 91.47%
Ka/Ks Ratio 0.00757 (Ka = 0.0041, Ks = 0.5402)

Genome Location

Sequence Coding sequence

Length: 648 bp    Location: 7858424..7862716   Strand: +
>XM_004854784.1
ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTGCAAACTTGCCGAGAGGAGCACAAGAAGAAGCACCCAGATGCTTCCGTTAATTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGACATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATTCCTCCTAAAGGAGAAACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTTCTTGTTCTGTTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTTTCCATTGGTGATGTTGCAAAGAAACTGGGAGAAATGTGGAATAATACTGCAGCAGATGACAAGCAGCCTTATGAGAAGAAGGCTGCCAAGCTGAAGGAAAAGTATGAAAAGGACATCGCTGCCTACCGAGCTAAAGGAAAACCTGATGCTGCAAAAAAGGGAGTTGTGAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAAGAAGATGAGGAAGATGAAGAGGATGAAGAGGAGGAAGAAGACGAAGAGGATGAAGATGAAGAAGAAGATGATGATGATGAATAA

Related Sequences

XP_004854841.1 Protein

Hmgb1 PREDICTED: high mobility group protein B1 [Heterocephalus glaber]

Length: 215 aa     
>XP_004854841.1
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE