Gene Symbol | Hps5 |
---|---|
Gene Name | Hermansky-Pudlak syndrome 5, transcript variant X1 |
Entrez Gene ID | 101714520 |
For more information consult the page for NW_004624766.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Protein Percentage | 88.92% |
---|---|
CDS Percentage | 89.41% |
Ka/Ks Ratio | 0.25008 (Ka = 0.0676, Ks = 0.2702) |
Hermansky-Pudlak syndrome 5
Protein Percentage | 85.73% |
---|---|
CDS Percentage | 87.57% |
Ka/Ks Ratio | 0.25666 (Ka = 0.0832, Ks = 0.3241) |
Hermansky-Pudlak syndrome 5 homolog (human)
Protein Percentage | 80.62% |
---|---|
CDS Percentage | 82.05% |
Ka/Ks Ratio | 0.21354 (Ka = 0.1159, Ks = 0.5426) |
Hermansky-Pudlak syndrome 5 (Hps5), mRNA
Protein Percentage | 79.84% |
---|---|
CDS Percentage | 81.76% |
Ka/Ks Ratio | 0.2373 (Ka = 0.1242, Ks = 0.5232) |
>XM_004851528.1 ATGACTTTTGTGCCCACGATCCCAGAGTCTTACAGCCATGTTCTCGCGGAGCTTGAGTCCCTGGACCCGTTACTTTCAGCTCTGCGGCTGGACTCCAGTCGTCTAAAGTGCACCAGCATAGCTGTGTCTCGGAAATGGCTGGCCTTGGGCAGCTCGGGAGGAGGAGTCAATCTCATTCAGAAAGAAGGCTGGAAGCACAGGCTTTTTCTCTCGCACCGGGAAGGTTCAATTTCTCAGGTTGCCTGTTGTTCACATGATGACGATTATGTTGCTGTAGCTACCAGTCAAGGTCTTGTAGTTGTTTGGGAATTAAATCAAGAGCATCGTGGGAAACCAGAACGAATTTATGTGTCTTCAGAACACAAAGGCCGAAAAGTTACAGCTCTCTGTTGGGATACAGCTGTTCTTAGAATCTTTGTAGGTGACCATGTGGGGAAAGTTTCTGCCATCAAACTCCACACTTCTAAACAAGCAAAGGCAGCTTCTGTCTTTGTGATGTTTCCTGTTCAGACAATAACAACAGTCGACTCCTGTGTTGTCCAGCTAGATTATTTGGATGGAAGGCTCCTTGTATCTTCCCTTACTCGAGCCTTCTTGTGTGACACTGAGAGAGAGAAGTTTTGGAAAATTGGAAACAAGGAAAGAAATGGAGAATATGGAGCTTGTTTCTTCCCTGGAAGGTGTTCTGGGGGCCAGCAACCTCTAATATATTGTGCTCGTCCTGGCTCCAGGATGTGGGAAGTGAGCTTTGATGGGGAAGTTAGAAGTACACATCAGTTCAAGAAACTCCTCTCGTTGCCACCTCTTCCTGTGATTACTCCAAGATCTGAACCTCAGTATGATCATACAGTGGGATCCTCCCAGTCTTTGTCTTTCCCCAGACTCTTGCATCTTAGTGAGCATTGTGTGCTGACTTGGACAGAAAAAGGAATTTATATTTTTATTCCTCAGAATGTTCAAGTTCTTCTTTGGAGTGAAGTCAAAGATATTCAGGATGTGGCTGTCTACAAGAATGAGCTGTTCTGTTTGCACCTGAACGGGAAAGTCTCACATCTTTCTCTGCTGTCTGTGGAGCGCTGTGTGGAACGTCTGCTAAGGAGAGGTCTGTGGGTTCTGGCTGCTCGCACATGCTATCTGTTCCAAAATTCCATTGTTGCCAGCAAGGCAAGAAAAACTTTGACTATAGATAAATTGGAGCACTTGAAGTCTCAGCTGGATCTTGAAACTTATAGTGATCTCATTCCTCAACTGGATGAATTGATATTGAAATTTGAACCTTTGGATTCAGCTTGCAGCAGTAGAAGAAGCTCTATTTCATCACATGAGAGTTTCAGCATCTTGGACTCTGGTATTTATCGTATCATTAGTAGTAGAAGAGGCAGTCAGTCAGATGAAGATTCTTGCTCCCTTCACAGCCAAACCTTCTCGGAAGATGAGAGACTTAAAGAATTCACCTCACATCCAGAAGAGGACCAGCCAGACAATGTTTCTCATGTTCCAGTGACGTTTGAGACAGATAAGAATGAAACTTTTCTCCCCTTCGGCATTCCATTACCATTTCGTTCTCCATCTCCTCTTGTATCTCTTCAGGCTGTCAAAGACAGTGTTTCTAGCTTTGTGCGTAAAACTACTGAGAAGATTGGTACCCTTCACACAAGTCCTGAGCTAAAAGTGAGACCAGAACCCAGGGATGAAGATCAGTCTTGCGAAGAGGAAGTGAGTTCAGTTACATGCCCACAGGAAGAAGTCACTGAGGAGAAAAAAGAAGTAATTAGTCAACCCCCAAAAGAAGACAGGTTCCAAGAGCTCACAGCAGCAACAGCAGAAGCAATGACCAAGCTACTGGACCCTTTGGTTTTGTTTGAACCCCAGTCTCTGAGAGTGGTTTTACAAGAGTGGCTTTCACACTTAGAAAGGACATTTGCCATGAGAGACTCTCCAGGCACTTCAGATACTGGCAACTCACTTGTGAAACTGAACCAAGATGAGTCAAAAAAGAGAATAGTGGGTGAAGATAATGAAGGAGAAAAAAGGGACTCTTTAGACAATGAAGAAACTGTTGACCCAACAGCGTGTGAATCCATAAATAGTCCAAGGGAGCCCTCGGATGATGACCTTTTCCAAGTGTGTTCCCCATGCGCCATACCAACCAGTCTTCAGAAGGACCTGGCTGAGTTGACAGCATTGTGTTTGGAATTGAACGTTTTGAATTCTGCTATCAAAAGCACGGATGGACATGCAGACCATACTTTGCAACAGTGTTCACCTGAAATTCTGGCTTGTCAGTTTGTAAAGAAGTACTTTTTTCTCCTGGATTTGAAAAGAACAAAAGAGAGTATCAAGCTTAGTTATACTAGCAGCTCCCGTATTTGGGATACTTTCATTGAAGGATTGAAAGAAATGGCCAGTTCTAACCCTACTTATATGGAGATGGGAGAAGGAGACCTACCAACAAGATTAAAGTTATTGGATGACTCCATTCCTTTTGATAGTCCTTTGTTGATTGCTTATGCCACCCGGTTATATGAGAAGTTTGGAGAATCTGCCCTTCGATCCTTGATCAGGTTTTATCCATCCATTTTGCCTTCAGACATCATACAACTTTGTCGTCATCATCCAGCTCAGTTTCTGGCCTATTTAGATAGTTTGGTGAAATCAAGACCTGAAGACCAGCGGTCATCTTTCCTAGAGTCCCTTCTGCAACCAGAGTCCTTAAGATTAGATTGGCTACTTTTGGCAGTGTCCCATGATGCTCCACCAAGCACCAGTACTGTGGATGATGAAGGGTACCCCAGGCCTCATTCGCACTTGTTCTCCTGGGGTTACAGTCAACTGATCCTTTATCTAATTAAACTTCCTGCAGATTTTACAACCAAAGAGAAAATGACAGACATCTGTAAGTCTTGTGGTTTCTGGCCTGGATATCTAACTCTGTGCTGGGAGCTGGAGAGAAGAAGAGAGGCGTTTGCCAACATCGTGTATCTGAATGATATGAGCCTGATGTCAGGGGACAATGGTGCGTATGTCCCAGTGGATTACTCTTGCAGGTGGTATTTTACAAGTCTCTCTAGACTTTTTCATAAAGAAATGTGGTGA
Hps5 PREDICTED: Hermansky-Pudlak syndrome 5 protein isoform X1 [Heterocephalus glaber]
Length: 1031 aa View alignments>XP_004851585.1 MTFVPTIPESYSHVLAELESLDPLLSALRLDSSRLKCTSIAVSRKWLALGSSGGGVNLIQKEGWKHRLFLSHREGSISQVACCSHDDDYVAVATSQGLVVVWELNQEHRGKPERIYVSSEHKGRKVTALCWDTAVLRIFVGDHVGKVSAIKLHTSKQAKAASVFVMFPVQTITTVDSCVVQLDYLDGRLLVSSLTRAFLCDTEREKFWKIGNKERNGEYGACFFPGRCSGGQQPLIYCARPGSRMWEVSFDGEVRSTHQFKKLLSLPPLPVITPRSEPQYDHTVGSSQSLSFPRLLHLSEHCVLTWTEKGIYIFIPQNVQVLLWSEVKDIQDVAVYKNELFCLHLNGKVSHLSLLSVERCVERLLRRGLWVLAARTCYLFQNSIVASKARKTLTIDKLEHLKSQLDLETYSDLIPQLDELILKFEPLDSACSSRRSSISSHESFSILDSGIYRIISSRRGSQSDEDSCSLHSQTFSEDERLKEFTSHPEEDQPDNVSHVPVTFETDKNETFLPFGIPLPFRSPSPLVSLQAVKDSVSSFVRKTTEKIGTLHTSPELKVRPEPRDEDQSCEEEVSSVTCPQEEVTEEKKEVISQPPKEDRFQELTAATAEAMTKLLDPLVLFEPQSLRVVLQEWLSHLERTFAMRDSPGTSDTGNSLVKLNQDESKKRIVGEDNEGEKRDSLDNEETVDPTACESINSPREPSDDDLFQVCSPCAIPTSLQKDLAELTALCLELNVLNSAIKSTDGHADHTLQQCSPEILACQFVKKYFFLLDLKRTKESIKLSYTSSSRIWDTFIEGLKEMASSNPTYMEMGEGDLPTRLKLLDDSIPFDSPLLIAYATRLYEKFGESALRSLIRFYPSILPSDIIQLCRHHPAQFLAYLDSLVKSRPEDQRSSFLESLLQPESLRLDWLLLAVSHDAPPSTSTVDDEGYPRPHSHLFSWGYSQLILYLIKLPADFTTKEKMTDICKSCGFWPGYLTLCWELERRREAFANIVYLNDMSLMSGDNGAYVPVDYSCRWYFTSLSRLFHKEMW