Details from NCBI annotation

Gene Symbol Sox6
Gene Name SRY (sex determining region Y)-box 6, transcript variant X8
Entrez Gene ID 101697252

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SOX6 ENSCPOG00000012090 (Guinea pig)

Gene Details

SRY (sex determining region Y)-box 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010872, Guinea pig)

Protein Percentage 98.09%
CDS Percentage 96.27%
Ka/Ks Ratio 0.08459 (Ka = 0.0099, Ks = 0.1165)

SOX6 ENSG00000110693 (Human)

Gene Details

SRY (sex determining region Y)-box 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000379644, Human)

Protein Percentage 97.39%
CDS Percentage 95.26%
Ka/Ks Ratio 0.07694 (Ka = 0.0123, Ks = 0.1598)

Sox6 ENSMUSG00000051910 (Mouse)

Gene Details

SRY-box containing gene 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072583, Mouse)

Protein Percentage 96.31%
CDS Percentage 92.24%
Ka/Ks Ratio 0.06646 (Ka = 0.019, Ks = 0.2853)

Sox6 ENSRNOG00000020514 (Rat)

Gene Details

SRY (sex determining region Y)-box 6 (Sox6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000044088, Rat)

Protein Percentage 96.32%
CDS Percentage 92.12%
Ka/Ks Ratio 0.06527 (Ka = 0.019, Ks = 0.2909)

Genome Location

Sequence Coding sequence

Length: 2490 bp    Location: 8047808..7683495   Strand: -
>XM_004851484.1
ATGCCCTCGAGTTCTGAAGTTCTGGCTGATGTGGTAAGAGAAAGCCGGATTGAAGAGTGGAAGAGCAGCCACTTCATAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGAAGCCATGACCCAGGATTTGACCTCAAGGGAAAAGGAAGAGGGCAATGATCAACATGTGGCCTCCCATCTGCCCCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTATCAGTACCGTTCAACAAGATGCTGACTGGGACAGTGTTCTGTCATCCCAGCAAAGAATGGAGTCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGAGCAGTGTTGCTTTTGGAACCCCAGAGCGCCGCCGAGGGAGCCTTGCTGATGTGGTGGATACACTGAAACAGAAGAAGCTTGAGGAGATGACTCGGACTGAACATGAGGATTCCTCCTGCATGGAAAAACTACTTTCAAAAGATTGGAAGGAAAAAATGGAAAGACTAAATACAAGTGAACTTCTTGGAGAAATTAAAGGAACACCTGAGAGCCTGGCAGAAAAAGAACGGCAGCTCTCCACTATGATTACCCAGCTGATCAGTTTACGGGAGCAGCTCCTGGCAGCGCATGATGAACAGAAAAAACTGGCAGCCTCACAAATTGAGAAACAACGGCAGCAAATGGACCTTGCTCGCCAACAGCAAGAACAGATTGCAAGACAACAGCAGCAACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCAGCAACAGATCCAGCAGGTTCAGGGTCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACCCTGGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTCCCCCCTGGAATAACATACAAACCAGGTGATAACTATCCTGTACAGTTCATTCCATCAACAATGGCAGCTGCTGCTGCTTCTGGACTCAGCCCTTTACAGCTCCAGCAGCTCTACGCCGCTCAGCTGGCCAACATGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTCCGCAGCCTCCAAACACAGCAGGCGCCATCTCACCTACTGGGATAAAAAATGAAAAGAGAGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGCAGCAGCACAGCCGCTGAATCTCTCATCCAGACCCAAGACTGCAGAGCCTATAAAGTCCCCAACATCTCCCACCCAGAGCCTCTTCCCAGCCAGCAAAACTAGCCCTGTCAATCTGCCAAACAAAAGCAGCATCCCCAGCCCCATTGGAGGAAGCTTGGGAAGAGGATCCTCTTTAGGTAAATGGAAAAGTCAACACCAGGAAGAGACTTATGAATTAGATATCTTGTCCAGTCTCAACTCCCCTGCCCTGTTTGGGGATCAGGACACAGTGATGAAAGCCATTCAGGAGGCTCGGAAAATGCGAGAACAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGAATTGATGGAAAACTGTCCTCCATGAATAATATGGGACTGAACAACTGCAGGAATGAAAAGGAAAGAACACGCTTTGAGAATTTGGGGCCCCAGTTAACAGGAAAGTCAAGTGAAGATGGAAAGCTGGGCCCAGGTGTCATCGACCTTACTCGGCCAGAAGATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCAGCTAAACTACAGCAGTATTATTGTTGGCCAACAGGAGGTGCCACTGTGGCTGAAGCTCGAGTCTACAGGGATGCCCGAGGCCGGGCCAGCAGTGAGCCACACATCAAGAGACCAATGAATGCATTCATGGTTTGGGCGAAGGACGAGAGGAGGAAAATCCTTCAGGCCTTCCCTGACATGCACAACTCCAACATTAGTAAAATATTAGGATCTCGCTGGAAATCCATGTCGAACCAGGAGAAGCAGCCTTATTATGAAGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGAAGTATCCAAACTATAAATACAAACCCCGGCCGAAACGCACCTGCATTGTTGATGGCAAAAAGCTCCGGATCGGGGAGTATAAGCAACTGATGCGGTCTCGGCGACAAGAAATGAGGCAGTTCTTTACTGTGGGGCAACAGCCTCAGATTCCAATCACCACAGGAACAGGTGTTGTGTATCCTGGTGCTATTACTATGGCAACTACCACACCATCACCTCAGATGACATCTGACTGCTCTAGCACCTCTGCCAGCCCGGAGCCCAGCCTCCCTGTCATCCAGAGCACTTACGGAATGAAGACAGACGGTGGAAGCCTCACTGGAACCGAAATGATGAACGGAGAGGATGAAATGGAAATGTACGACGACTATGAAGACGATCCCAAATCAGACTATAGCAGTGAAAACGAAGCCCCGGAGGCTGTTAGTGCCAACTGA

Related Sequences

XP_004851541.1 Protein

Sox6 PREDICTED: transcription factor SOX-6 isoform X8 [Heterocephalus glaber]

Length: 829 aa      View alignments
>XP_004851541.1
MPSSSEVLADVVRESRIEEWKSSHFIRMSSKQATSPFACAADGEEAMTQDLTSREKEEGNDQHVASHLPLHPIMHNKPHSEELPTLISTVQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMSSVAFGTPERRRGSLADVVDTLKQKKLEEMTRTEHEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLANMQVSPGAKMPSTPQPPNTAGAISPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPIKSPTSPTQSLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLGKWKSQHQEETYELDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGIDGKLSSMNNMGLNNCRNEKERTRFENLGPQLTGKSSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLTGTEMMNGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN