Details from NCBI annotation

Gene Symbol Mmp16
Gene Name matrix metallopeptidase 16 (membrane-inserted)
Entrez Gene ID 101711864

Database interlinks

Part of NW_004624744.1 (Scaffold)

For more information consult the page for NW_004624744.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MMP16 ENSCPOG00000002700 (Guinea pig)

Gene Details

matrix metallopeptidase 16 (membrane-inserted)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002451, Guinea pig)

Protein Percentage 95.73%
CDS Percentage 94.11%
Ka/Ks Ratio 0.13535 (Ka = 0.0253, Ks = 0.1866)

MMP16 ENSG00000156103 (Human)

Gene Details

matrix metallopeptidase 16 (membrane-inserted)

External Links

Gene Match (Ensembl Protein ID: ENSP00000286614, Human)

Protein Percentage 96.51%
CDS Percentage 93.22%
Ka/Ks Ratio 0.07699 (Ka = 0.0197, Ks = 0.2556)

Mmp16 ENSMUSG00000028226 (Mouse)

Gene Details

matrix metallopeptidase 16

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029881, Mouse)

Protein Percentage 96.32%
CDS Percentage 91.47%
Ka/Ks Ratio 0.0509 (Ka = 0.0193, Ks = 0.379)

Mmp16 ENSRNOG00000005708 (Rat)

Gene Details

matrix metallopeptidase 16 (Mmp16), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040229, Rat)

Protein Percentage 96.12%
CDS Percentage 91.21%
Ka/Ks Ratio 0.04819 (Ka = 0.0198, Ks = 0.4119)

Genome Location

Sequence Coding sequence

Length: 1551 bp    Location: 3544267..3797230   Strand: +
>XM_004842175.1
ATGATCTTACTCGCCTTCAGCACTGGAAGACGGGTGGATTTCGTGCATCACTCGGGGGTGTTTTTCTTGCAAACCTTGCTTTGGATTGTGTGTGCTACAGTCTGCGGAACGGAGCAGTATTTCAATGTGGAGGTTTGGTTACAAAAGTACGGCTACCTCCCACCAACTGACCCCAGAATGTCGGTGCTGCGCTCTGCAGAGACCATGCAGTCCGCCCTAGCGGCCATGCAGCAGTTCTATGGCATAAACATGACAGGAAAAGTGGACAGAAACACAATTGACTGGATGAAGAAACCTCGATGTGGTGTACCTGATCAGACAAGAGGTAGCTCCAAATTTAATATTCGTCGAAAGCGGTATGCATTAACAGGACAGAAGTGGCAGCACAAACACATCACATACAGGTATAAAAATAATGACAATGTTCTCTCAGTTAGAAATGACTTATTTCTCGTAGCAGTTCATGAGCTGGGACACGCTTTGGGACTGGAACATTCCAATGACCCCACTGCCATCATGGCTCCATTTTACCAGTATATGGAAACAGACAACTTCAAACTTCCTAATGATGATTTGCAGGGCATTCAGAAGATATATGGTCCACCTGACAAGATCCCTCCGCCTACAAGACCTCTACCGACAGTGCCCCCACATCGCTCCATTCCTCCAGTGGACCCAAGGAGAAATGACAGGCCGAAGCCTCCTCGGCCTCCCACTGGCAGACCTTCCTATCCTGGAGCCAAGCCCAACATCTGTGATGGCAACTTTAACACTCTAGCTATTCTTCGCCGTGAGATGTTTGTTTTCAAGGACCAGTGGTTTTGGCGAGTAAGAAACAACAGAGTGATGGATGGATACCCCATGCAGATTACTTATTTCTGGCGGGGCTTGCCTCCTAGTATCGATGCAGTATATGAAAACAGTGATGGGAATTTTGTCTTCTTTAAAGGCAACAAATACTGGGTGTTCAAGGACACAACTCTGCAACCTGGTTACCCTCATGACTTGATTACTCTTGGAAATGGAATCCCTCCTCATGGTATTGATTCAGCCATTTGGTGGGAAGATGTTGGGAAAACCTATTTCTTCAAAGGGGACAGGTATTGGAGATATAGTGAAGAAATGAAAACCATGGACCCTGGCTATCCCAAGCCAATCACAGTCTGGAAAGGGATCCCTGAATCTCCTCAGGGAGCTTTTGTGCACAAAGAAAATGGCTTTACTTATTTCTACAAAGGAAAGGAGTATTGGAAATTCAACAACCAGATACTCAAGGTAGAACCTGGATATCCGAGATCCATCCTCAAGGATTTTATGGGCTGTGATGGACCAACAGACAGAGATAGAGAAGGACACAGCCCACCAGACGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACTGTGAAAGCCATAGCTATTGTCATTCCCTGCATCTTGGCCTTATGCCTCCTTGTATTGGTTTACACTGTGTTCCAGTTCAAGAGGAAGGGAACACCCCGCCACATACTGTACTGTAAACGCTCTATGCAAGAGTGGGTGTGA

Related Sequences

XP_004842232.1 Protein

Mmp16 PREDICTED: matrix metalloproteinase-16 [Heterocephalus glaber]

Length: 516 aa      View alignments
>XP_004842232.1
MILLAFSTGRRVDFVHHSGVFFLQTLLWIVCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYRYKNNDNVLSVRNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPTRPLPTVPPHRSIPPVDPRRNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITVWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDREGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV