Details from NCBI annotation

Gene Symbol Trim55
Gene Name tripartite motif containing 55
Entrez Gene ID 101718407

Database interlinks

Part of NW_004624744.1 (Scaffold)

For more information consult the page for NW_004624744.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM55 ENSCPOG00000001635 (Guinea pig)

Gene Details

tripartite motif containing 55

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001475, Guinea pig)

Protein Percentage 91.88%
CDS Percentage 93.48%
Ka/Ks Ratio 0.28415 (Ka = 0.0412, Ks = 0.1449)

TRIM55 ENSG00000147573 (Human)

Gene Details

tripartite motif containing 55

External Links

Gene Match (Ensembl Protein ID: ENSP00000323913, Human)

Protein Percentage 89.91%
CDS Percentage 90.28%
Ka/Ks Ratio 0.20081 (Ka = 0.0534, Ks = 0.266)

Trim55 ENSMUSG00000060913 (Mouse)

Gene Details

tripartite motif-containing 55

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029139, Mouse)

Protein Percentage 82.94%
CDS Percentage 85.38%
Ka/Ks Ratio 0.23334 (Ka = 0.0956, Ks = 0.4099)

Trim55 ENSRNOG00000012723 (Rat)

Gene Details

tripartite motif-containing 55 (Trim55), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017125, Rat)

Protein Percentage 83.12%
CDS Percentage 85.44%
Ka/Ks Ratio 0.24106 (Ka = 0.0965, Ks = 0.4004)

Genome Location

Sequence Coding sequence

Length: 1644 bp    Location: 25246780..25197626   Strand: -
>XM_004842118.1
ATGAGTGCATCTCTGAATTACAAGTCTTTTTCCAAAGAGCAGCAAACCATGGATAACTTGGAGAAACAACTTATCTGTCCCATCTGCCTAGAGATGTTCACGAAACCAGTGGTCATTCTCCCCTGTCAACATAACCTGTGTAGAAAATGTGCCAGTGACATTTTCCAGGCCTCTAACCCATACTTGCCCACAAGAGGAGGCACCACTGTGGCATCTGGGGGCCGATTCCGCTGCCCCTCCTGTAGACATGAAGTGGTTTTGGATAGACATGGTGTATATGGACTTCAGAGGAACCTGCTGGTGGAAAACATCATCGACATCTACAAGCAGGAGTCCATCAGACCAGAAAAGAAGTCTGATCAGCCCATGTGTGAGGAGCACGAAGAGGAGCACATCAACATCTACTGTCTGAACTGTGAAGTGCCCACCTGCTCCCTGTGCAAGGTGTTTGGTGCTCACAAGGCCTGCCAGGTGGCTCCACTCACTCACGTGTTCCAAAGGCAGAAGTCGGAGCTCAGTGATGGCATTGCTGTCCTTGTGGGAAGCAACGATCGAGTCCAGGGAATGATCAGTCAACTGGAGGACACTTGTAAGACTATTGAGGAATGCTGCAGAAAACAGAAACAAGACCTTTGTGAGAAGTTTGATTACCTATATGGCATCCTAGAGGAGAGGAAGAATGAAATGACCCAAGTCATCACCCGAACCCAAGAGGAGAAGTTGGAACATGTCCGCGCGCTCATCAAAAAGTATTCCAATCATCTGGAGAACGTATCCAAGTTAGTTGAGTCAGGAATTCAGTTCATGGATGAGCCAGAAATGGCGGTGTTTCTGCAGAATGCCAAAACCCTGTTACAAAAAATCTCGGAAGCATCGAAGGCATTTCAGATGGAGAAAATAGAACATGGTTATGAGAACATGAACCACTTCACAGTCGATCTCAATAGAGAAGAAAAAATAATACGTGAAATTGATTTTTACAGAGAAGATGAAGATGAAGATGAAGAAGGAGGAGGAAGAGGAGAAAGAGAAGAAGAAGGAGAGGAAGTAATAGAAGTGGAAGAGGTAGAAAGTGCTCAAATAGAGTCATCAGGAGCAGGTGAACGTCCAGGAAAAGCCTCAGAGCCCTCTCAGCTGGCCGTGGAGCTTGAGGCTGCCCCAGGGGCACTTCCAGTTTCCTCTCTAGAGCCACCTCCAACCCTGCCACCTACTGAAGATGCCTCAGTGACACAGGGGGAGGTTGTGCCCACTAGCTCTCAGCAGAGCACAGAGTCTGAAACTCCAATCCCTGAAGCAGCGGAAACTGCAGATCCCTTGTTTTACCCTAGTTGGTATAAAGCCCAAACCCGGAAAGCCACCACCAACCCACTTTGCACCCCAGGGAGTGAAGGTCTGGGGCAAATAGGGTCTCCAGGTTCTGAGAATTCGAATGTGCAGATGGCAGAAATGGCAGACGCCGCAGCCAATGAGAAGGCAGCAGTGAGTGGTAAGGAAACTAGTTCACCTGCGGCTTCTTCTCAGATTGGCTCTGAGGCCCCTCCCCTCCAGGGACAGGCTGCAGCTTCAGGGAGTGGAAGTGGAGCTGATTCAGAGCCAGCTCGGCATGTCTTCTCCTTCTCCTGGTTGAACTCCCTGAATGAATGA

Related Sequences

XP_004842175.1 Protein

Trim55 PREDICTED: tripartite motif-containing protein 55 [Heterocephalus glaber]

Length: 547 aa      View alignments
>XP_004842175.1
MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESIRPEKKSDQPMCEEHEEEHINIYCLNCEVPTCSLCKVFGAHKACQVAPLTHVFQRQKSELSDGIAVLVGSNDRVQGMISQLEDTCKTIEECCRKQKQDLCEKFDYLYGILEERKNEMTQVITRTQEEKLEHVRALIKKYSNHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLQKISEASKAFQMEKIEHGYENMNHFTVDLNREEKIIREIDFYREDEDEDEEGGGRGEREEEGEEVIEVEEVESAQIESSGAGERPGKASEPSQLAVELEAAPGALPVSSLEPPPTLPPTEDASVTQGEVVPTSSQQSTESETPIPEAAETADPLFYPSWYKAQTRKATTNPLCTPGSEGLGQIGSPGSENSNVQMAEMADAAANEKAAVSGKETSSPAASSQIGSEAPPLQGQAAASGSGSGADSEPARHVFSFSWLNSLNE