Details from NCBI annotation

Gene Symbol Cops5
Gene Name COP9 signalosome subunit 5, transcript variant X1
Entrez Gene ID 101710038

Database interlinks

Part of NW_004624744.1 (Scaffold)

For more information consult the page for NW_004624744.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COPS5 ENSCPOG00000011793 (Guinea pig)

Gene Details

COP9 signalosome subunit 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010608, Guinea pig)

Protein Percentage 99.35%
CDS Percentage 96.53%
Ka/Ks Ratio 0.02104 (Ka = 0.003, Ks = 0.1418)

COPS5 ENSG00000121022 (Human)

Gene Details

COP9 signalosome subunit 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000350512, Human)

Protein Percentage 99.35%
CDS Percentage 93.7%
Ka/Ks Ratio 0.01067 (Ka = 0.003, Ks = 0.2837)

Cops5 ENSMUSG00000025917 (Mouse)

Gene Details

COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027050, Mouse)

Protein Percentage 99.35%
CDS Percentage 91.21%
Ka/Ks Ratio 0.00668 (Ka = 0.003, Ks = 0.4532)

Cops5 ENSRNOG00000006499 (Rat)

Gene Details

COP9 signalosome subunit 5 (Cops5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008877, Rat)

Protein Percentage 99.02%
CDS Percentage 90.77%
Ka/Ks Ratio 0.00992 (Ka = 0.0046, Ks = 0.4628)

Genome Location

Sequence Coding sequence

Length: 924 bp    Location: 24287307..24317322   Strand: +
>XM_004842091.1
ATGGCAGCGTCCGGGAGCGGTATGGCTCAGAAAAGCTGGGAATTGGCCAACAACATGCAGGAAGCCCAGAGTATCGATGAAATCTACAAATACGACAAAAAACAGCAGCAAGAAATCCTGGCAGCGAAGCCCTGGACTAAGGATCACCATTACTTTAAGTACTGTAAAATCTCAGCACTGGCTCTGTTGAAAATGGTAATGCATGCCAGATCAGGAGGCAACTTGGAAGTGATGGGTTTGATGCTTGGAAAAGTGGATGGTGAAACCATGATCATTATGGACAGTTTTGCTTTGCCTGTAGAGGGCACCGAAACCCGAGTAAATGCTCAAGCTGCTGCATATGAGTACATGGCCGCATACATAGAAAATGCCAAACAGGTTGGCCGCCTTGAAAATGCAATTGGCTGGTATCACAGCCACCCTGGCTATGGCTGTTGGCTTTCTGGGATTGATGTCAGCACACAGATGCTTAACCAGCAGTTCCAGGAACCATTCGTAGCAGTAGTTATTGATCCAACAAGAACAATATCTGCAGGGAAAGTGAATCTTGGGGCTTTTAGGACATACCCAAAGGGCTACAAACCTCCTGATGAAGGACCTTCTGAGTATCAAACTATCCCACTAAATAAAATAGAAGACTTTGGTGTACATTGCAAACAATACTATGCCTTAGAAGTCTCATATTTCAAATCATCTTTGGATCGCAAATTACTTGAGCTCTTGTGGAATAAATACTGGGTGAATACACTGAGTTCCTCTAGCTTGCTTACTAATGCAGACTATACCACTGGTCAGGTGTTTGATTTGTCTGAAAAGTTAGAACAGTCAGAAGCCCAGCTGGGCCGAGGAAGTTTTATGTTGGGTTTAGAAACACATGACCGAAAGTCAGAAGACAAACTTGCCAAAGCTACAAGAGACAGGTAA

Related Sequences

XP_004842148.1 Protein

Cops5 PREDICTED: COP9 signalosome complex subunit 5 isoform X1 [Heterocephalus glaber]

Length: 307 aa      View alignments
>XP_004842148.1
MAASGSGMAQKSWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDR