Gene Symbol | Col20a1 |
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Gene Name | collagen, type XX, alpha 1 |
Entrez Gene ID | 101714112 |
For more information consult the page for NW_004624741.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
collagen, type XX, alpha 1
Protein Percentage | 78.49% |
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CDS Percentage | 82.16% |
Ka/Ks Ratio | 0.269 (Ka = 0.1383, Ks = 0.514) |
collagen, type XX, alpha 1
Protein Percentage | 78.72% |
---|---|
CDS Percentage | 81.76% |
Ka/Ks Ratio | 0.18635 (Ka = 0.1242, Ks = 0.6665) |
collagen, type XX, alpha 1
Protein Percentage | 74.32% |
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CDS Percentage | 78.36% |
Ka/Ks Ratio | 0.21498 (Ka = 0.157, Ks = 0.7303) |
Protein Percentage | 73.79% |
---|---|
CDS Percentage | 77.95% |
Ka/Ks Ratio | 0.21312 (Ka = 0.1606, Ks = 0.7536) |
>XM_004841048.1 ATGAACCCCCAAGGCCACCCCGCCCTCCACTTCTGCCTCTGGCTGTGGCTGGGTGCCATCTCCACACGTGGGCAGGGACAAGGAGGTGGCCGCCTGAGGCTGGCCGTGCTGCCCGAGGACCGGCTGCAGATGAAGTGGCGAGACCTGCAGGGCGGCGGCCTCGGCTATCTGGTGCAGGTGAAGCCCATGGCAGGGGACTCAGAGCAGGAAGTGATGCTGACCACCAAGACCCCCAAGGCCACCGTCGGGGGCCTGAGCCCCTCCAAGGGCTACATCTTGCAGATATTTGAGCTCACTGGCTCGGAGCCCACCCTGCTGGTGCGGAGGGAGTTTGTGATCAAGGATCTGAAGAGTAAGCCCCTGAGCAGGAGTGGCCAGAGGCCACCAGGGACAGCCCTAAAGCCTCTACCCTCCCACATGGGGGGCCCGGGCCCCAAGCAGACCCCTGAGCCCAGCATCACCTTTGTGCCCAGCCAAGAGCCGCCTGTGCTTGCTGGCCCCCAGTTCCGCTGCACACCCCCCACGCCCACCGACATGGTCTTCCTGGTGGACGGGTCCTGGAGTGTCGGCCACAGCCACTTCCAGCTAGTCAAAGACTTCCTGGCCAGCGTCATCTCACCCTTTGAAATTGGGCCCAATCAAGTCCAAGTAGGCCTGACTCAGTACAGCGGAGACCCCCAGACTGAGTGGGACCTGAACTCCTTCCGCACCAGGGAGGAGGTGCTGGCCGCTGTGCACAGCCTTCGCTACAAGGGAGGAAACACATTCACAGGCCTCGCCCTGAGCCACGTGCTGGGGTACAACCTGAAGCCGGCGGCAGGTCTCCGTGCAGAGGCGGCTCACTTGGTGATCCTGGTGACGGATGGCAAGTCCCAGGACGATGTGCATGCAGCTGCACACACCCTCCAGGGCCTGGACGTCGAGGTCTTCACTGTGGGGGTGAAGAATGCCGACGAGGCTGAGCTGAAGCTCCTGGCCTCCCAGCCGCAGGACATCACCGTCCACAACGTGCTGGACTTCCCCCAGCTGGCCACCCTGGCTGGCCTGCTCAGCCGCCTCATCTGCCAGCAGGTCCAGGGCTGGAACCTGAGCAGGGCCCCAGCCACGTGGGCCCCAGCCGCTCCAGCTCTGGACACCCTCCCCGTCCCCACCAGCCTGGTGGTGACCCAGGTCACCTCCTCCAGCATCCGCCTGTCCTGGTCGCCGGCCCCTCAGCCGCCCCTCAAGTATCTCATCGTGTGGCGGCCTTCCAGGGGTGGCGTCCACCGGGAGGTGGTGGTGGAGGGGCCTGCAGCATCCACAGAGCTTCGGAACCTGAGCTCCAGCACCGAGTATTTGGTGTCTGTGCTCCCTGTCTATGAGGCCGGGGTCGGCGAGGGCCTGCAGGGCCTGGCGACCACAGCACCCCTCCCTCCACCCCGGGCGCTAACCCTGGCTGCAGTGACACCCAGGACCCTCCGCCTCACCTGGCAGCCCTCGGCTGGGGCCAGGCAGTACTTGGTGCGGTGCTCGCCAGCCTTCCCCAAGGGTGGGGAGGAGGAGATTGAGGTGCGGGTGGGGCAGCCAGAGGTGCTGCTGGATGGCCTGGAACCGGGCAGGGACTACATGGTCTCCGTGCAAAGCCTTCAAGGGCCAGAGGCCAGCGAGGCCCGGGGTGTCCACGCCAGAACCCCCGCCCTGGCCCCCCCAAGACACCTGGGCTTCTCAGACGTGAGCCACGACTCAGCCCGTGTGACCTGGGAAGGCACCCAGCGGCCCACATACCTGGTCAGGGTCAGCTACATCTCCAGCGACGGTGGCCACTCGGGACAGAAAGAGGCGCCTGGGAATGCCACCTCGGCCACCCTGGGCCCCCTGTCCTCCTCCACCACATACACTGTCCGAGTCACCTCCGTCCACCGGGGAGGCAGCTCCTCCACGCTGACCGGCCAGGTGACCACAGGGAAAGTGCCCAGCCCAAGCCAGCTGTCTGTGACAGAACTGCCAGGGAATGCAGTCAGGCTGACGTGGGCAGCTTCGGCCCCAACCGGCGTGCTTGTCTACCAGATCAAGTGGACTCCCCTGGGAGAGGGGAAGGCCCACGAGATCTCTGTGCCAGGCACTCTCAGCACAGCTGTCCTGCCCGGCCTGGGGAGGCACGAGGAATACGAAATCACCATCCTGGCCTACTACAGGGATGGGGCCCGCAGTGACCCTGTGTCCCTCCACTATACACCCCCTGCAGTGAGCAGGAGCCCCCCCTCAGGCCTGACCCTGTCCTTGGAGACCCCCAACAGCCTGCACGTCAGCTGGACACCCCCAAGTGGCCCCGTGCTCCACTACCGGGTCACCTATGCGCCAGCCTCGGGCTCAGGACCTGAGAAATCAATCTCCGTGGCAGGTCACAGGGGCCAGGCCACGCTCCCTGACCTGCTGGCTGCCACCAAGTACAAGGTCCTGGTCTCAGCTGTCTACGCAGTAGGGGAGAGTGTGGCTGTGTCTGCCACAGGCCGAACAGCAGCCTGCCCTGCCCTTCGCTGGAACAGCTCCCTTCCAGGGTTTGACCTGATGCTGGCTTTCGGCCTGGTGGAGAAGGAGTACGCCTCCATTCGAGGTGTGGCCATGGAGCCTTCGCCTTGGGGTGGGACCCCGACCTTCACACTCTTCAAGGATGCTCAGCTGACGCGGCGGGCCAGCGACATCCACGCCGCCGCGCTCCCGCCGGAGCACACCATCGTCTTCCTTCTGCGCCTGCTCCCCGAGGCGCCCCGCGAGGCCTTCGCGCTGTGGCAGATGACAGCCGAGGACTTCCAGCCTGTCCTCGGCATTCTTCTGGACGCCAGCAGGAAGTCGCTGACCTACTTCAACCACGACCCGAGGGCCGCCTTGCAGGAGGTCACCTTTGACCTGCAGGAGGTGAAGAAGATTTTCTTCGGGAGCTTCCACAAGGTTCATGTGGCTGTGGGCCGCACCAAGGTCAGACTCTACGTGGACTGCCGGAAGGTGGCCGAGAGGCCCATGGGAGAGGCTGGCAGGTCGCCCATCACCGGCTTTGTCACCCTGGGGAGGCTGGCCAAGGCACGGGGACCCCGGAGCAGCTCGGCCACATTCCAGCTCCAGATGCTGCAGATTCTGTGCAGTGACACCTGGGCAGACGAGGACGGGTGCTGTGAGCTCCCTGCTTTGAGGGACAAAGAGACGTGTCCGGCCTTCTCTTCTGCCTGTTCCTGTTCCTCTGACACCACTGGGCCCCCGGGGCCCCAAGGGCCTCCAGGCCCCCCAGGCAGGAACGGCACCCCAGGACAGCAGGGCCTCCCGGGGCCTAAGGGAGAGCCAGGGCCACCAGGACAGACAGGACCAGAGGGCCCTGGGGGACAGCAGGGGTCACCAGGGACTCAGGGCCGTGCAATCCAGGGGCCTGTGGGTCCACCGGGGGTCAAAGGAGAGAAGGGCGACCATGGCCTCCCGGGCTTGCAGGGCCACCCTGGCCAGCAAGGCGCTCCTGGGAGAGTTGGGCTCCAAGGACCAAAGGGAACGAGAGGACTGGAGGGGCCTGCTGGCCTGCCTGGACCCCCAGGCCCCCGGGGATTCCAGGGCTCAGCGGGAGCCAGGGGAACCAATGGGGAGCGAGGGCCCCCAGGGGCTGTGGGGCCCACGGGGCTTCCAGGACCCAAAGGGGAGCGAGGGGAGAAGGGGGAGCCTCAGTCCCTCACCACCATCTTCCAGCTGGTGAGCCAGGCCTGCGAGTCAGCCATCCAGACACATGTGCTCAAGCTGGACTCCTTCCTCCATGAGAACTCCAGGCCCCCGATGCCCATCCTGGTCGAGACAGTAGAGCCAGGCAGGCCTGGGCCCCTGGGGACCCCCAGCCTTCGAAGCAAGGCCTCACTTCCTGGAGAACAGGGGCGCAGGGACCACCGTCCTGAGCACCAAGGCCAGCCTGTAGCTGTCAGCCAGCCGGGCAGCCCTGGGCCCAGGGTAGCCGGGCCCCAGCATCCCAGGAGGGGACAGGACGCGCCCCGTGCTGCCTCGAGTGACCCTGGGCCTTCCGCCCGCACCTTCCCCTGGGTGTCTGGACACTGGGAGAAGAGTCCTGGCGAGGCGAGAATGAGGCCCCAGGAAGAGTGA
Col20a1 PREDICTED: collagen alpha-1(XX) chain [Heterocephalus glaber]
Length: 1368 aa View alignments>XP_004841105.1 MNPQGHPALHFCLWLWLGAISTRGQGQGGGRLRLAVLPEDRLQMKWRDLQGGGLGYLVQVKPMAGDSEQEVMLTTKTPKATVGGLSPSKGYILQIFELTGSEPTLLVRREFVIKDLKSKPLSRSGQRPPGTALKPLPSHMGGPGPKQTPEPSITFVPSQEPPVLAGPQFRCTPPTPTDMVFLVDGSWSVGHSHFQLVKDFLASVISPFEIGPNQVQVGLTQYSGDPQTEWDLNSFRTREEVLAAVHSLRYKGGNTFTGLALSHVLGYNLKPAAGLRAEAAHLVILVTDGKSQDDVHAAAHTLQGLDVEVFTVGVKNADEAELKLLASQPQDITVHNVLDFPQLATLAGLLSRLICQQVQGWNLSRAPATWAPAAPALDTLPVPTSLVVTQVTSSSIRLSWSPAPQPPLKYLIVWRPSRGGVHREVVVEGPAASTELRNLSSSTEYLVSVLPVYEAGVGEGLQGLATTAPLPPPRALTLAAVTPRTLRLTWQPSAGARQYLVRCSPAFPKGGEEEIEVRVGQPEVLLDGLEPGRDYMVSVQSLQGPEASEARGVHARTPALAPPRHLGFSDVSHDSARVTWEGTQRPTYLVRVSYISSDGGHSGQKEAPGNATSATLGPLSSSTTYTVRVTSVHRGGSSSTLTGQVTTGKVPSPSQLSVTELPGNAVRLTWAASAPTGVLVYQIKWTPLGEGKAHEISVPGTLSTAVLPGLGRHEEYEITILAYYRDGARSDPVSLHYTPPAVSRSPPSGLTLSLETPNSLHVSWTPPSGPVLHYRVTYAPASGSGPEKSISVAGHRGQATLPDLLAATKYKVLVSAVYAVGESVAVSATGRTAACPALRWNSSLPGFDLMLAFGLVEKEYASIRGVAMEPSPWGGTPTFTLFKDAQLTRRASDIHAAALPPEHTIVFLLRLLPEAPREAFALWQMTAEDFQPVLGILLDASRKSLTYFNHDPRAALQEVTFDLQEVKKIFFGSFHKVHVAVGRTKVRLYVDCRKVAERPMGEAGRSPITGFVTLGRLAKARGPRSSSATFQLQMLQILCSDTWADEDGCCELPALRDKETCPAFSSACSCSSDTTGPPGPQGPPGPPGRNGTPGQQGLPGPKGEPGPPGQTGPEGPGGQQGSPGTQGRAIQGPVGPPGVKGEKGDHGLPGLQGHPGQQGAPGRVGLQGPKGTRGLEGPAGLPGPPGPRGFQGSAGARGTNGERGPPGAVGPTGLPGPKGERGEKGEPQSLTTIFQLVSQACESAIQTHVLKLDSFLHENSRPPMPILVETVEPGRPGPLGTPSLRSKASLPGEQGRRDHRPEHQGQPVAVSQPGSPGPRVAGPQHPRRGQDAPRAASSDPGPSARTFPWVSGHWEKSPGEARMRPQEE