Details from NCBI annotation

Gene Symbol Arfgap1
Gene Name ADP-ribosylation factor GTPase activating protein 1, transcript variant X1
Entrez Gene ID 101712809

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARFGAP1 ENSCPOG00000025055 (Guinea pig)

Gene Details

ADP-ribosylation factor GTPase activating protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016095, Guinea pig)

Protein Percentage 92.42%
CDS Percentage 91.41%
Ka/Ks Ratio 0.11448 (Ka = 0.0376, Ks = 0.3282)

ARFGAP1 ENSG00000101199 (Human)

Gene Details

ADP-ribosylation factor GTPase activating protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000314615, Human)

Protein Percentage 86.04%
CDS Percentage 86.72%
Ka/Ks Ratio 0.12379 (Ka = 0.0717, Ks = 0.5795)

Arfgap1 ENSMUSG00000027575 (Mouse)

Gene Details

ADP-ribosylation factor GTPase activating protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029092, Mouse)

Protein Percentage 88.05%
CDS Percentage 87.45%
Ka/Ks Ratio 0.12782 (Ka = 0.0621, Ks = 0.4858)

Arfgap1 ENSRNOG00000043150 (Rat)

Gene Details

ADP-ribosylation factor GTPase activating protein 1 (Arfgap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013900, Rat)

Protein Percentage 88.34%
CDS Percentage 86.7%
Ka/Ks Ratio 0.11139 (Ka = 0.0618, Ks = 0.5549)

Genome Location

Sequence Coding sequence

Length: 1191 bp    Location: 28971334..28986717   Strand: +
>XM_004841043.1
ATGGCCAGCCCAAGGACCAGGAAAGTTCTTAAAGAAGTCAGAGTGCAAGATGAGAACAACGTTTGTTTTGAGTGTGGTGCATTCAACCCTCAGTGGGTCAGCGTGACTTATGGCATCTGGATCTGCCTGGAGTGCTCTGGGAAACACCGCGGGCTTGGGGTGCATCTCAGCTTTGTGCGCTCTGTTACAATGGACAAGTGGAAGGACATTGAGCTCGAGAAGATGAAGGCTGGTGGGAATGCTAAGTTCCAAGAGTTCCTGGAGTCACAGGAGGATTATGATCCGTCCTGGTCCCTGCAGGACAAGTACAACAGCAAAGCCGCAGCACTCTTTAGGGATAAGGTGGCCACTCTGGCTGAAGGCAGAGAATGGTCTCTGGAGTCATCGCCTGCCCAGAACTGGACCCCACCTCAGCCCAAGATACTGGCATCTGCTGTCCACCGACCCTCTGGCCAGACACAGAATGTGACCGCCTCTGCTGACAAGGCTTTTGAGGACTGGCTGAATGATGACCTTGGCTCCTATCAAGGGGCCCAGGAGAATCGCTACGTGGGGTTTGGGAACACGGCCCCATCTCAGAAGAGGGAAGATGACTTCCTCAACAATGCCATGTCATCCCTGTACTCGGGCTGGAGCAGTTTTACCACCGGAGCAAGCAAGTTTGCCTCTGCAGCCAGGGAAGGTGCTACAAAATTTGGATCCCAAGCAAGTCAGAAGTTTTGGGGTTACAAGCAGCAGCCAGAGCCGGCTTCAGAGTTGGGCCACAGCCTGAATGAGAATGTCCTCAAGCCTGCGCAGGAGAAGGTCCAGGGGGTCGGCAGCAAGGGGTGGCGGGATGTCACCACCTTCTTCTCCGGGAAGACAGACGAGCCCCCAAGCAGGCTCATCGAGGGCCAGAGCTACCAGAACAGTGGCAGGGACATCTTCCAGAACAACACCGTAGACCAGAGCTTCTGGGAGACCTTTGGGAGCACCGAACCCCCCAAGGCCAAGTCCCCGAGCAGTGACAGCTGGACCTGCGCAGACACCTCGACAGGGAGGAGGAGCTCAGACAGCTGGGACGTGTGGGGCTCAGGCTCCGCGTCCAACAACAAGAACAGCAACAGCGACGGCTGGGAGAGCTGGGAGGCCACCAAGAAGGCCGCGCCCCCCGCGGCTGTTGACGAGGGCTGGGACGACCAGAGCTGGTAG

Related Sequences

XP_004841100.1 Protein

Arfgap1 PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [Heterocephalus glaber]

Length: 396 aa     
>XP_004841100.1
MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFQEFLESQEDYDPSWSLQDKYNSKAAALFRDKVATLAEGREWSLESSPAQNWTPPQPKILASAVHRPSGQTQNVTASADKAFEDWLNDDLGSYQGAQENRYVGFGNTAPSQKREDDFLNNAMSSLYSGWSSFTTGASKFASAAREGATKFGSQASQKFWGYKQQPEPASELGHSLNENVLKPAQEKVQGVGSKGWRDVTTFFSGKTDEPPSRLIEGQSYQNSGRDIFQNNTVDQSFWETFGSTEPPKAKSPSSDSWTCADTSTGRRSSDSWDVWGSGSASNNKNSNSDGWESWEATKKAAPPAAVDEGWDDQSW