Details from NCBI annotation

Gene Symbol Gpcpd1
Gene Name glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae), transcript variant X2
Entrez Gene ID 101716686

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GPCPD1 ENSCPOG00000008966 (Guinea pig)

Gene Details

glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008057, Guinea pig)

Protein Percentage 96.57%
CDS Percentage 94.04%
Ka/Ks Ratio 0.075 (Ka = 0.0165, Ks = 0.2202)

GPCPD1 ENSG00000125772 (Human)

Gene Details

glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000368305, Human)

Protein Percentage 94.34%
CDS Percentage 91.31%
Ka/Ks Ratio 0.07134 (Ka = 0.0258, Ks = 0.3613)

Gpcpd1 ENSMUSG00000027346 (Mouse)

Gene Details

glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105769, Mouse)

Protein Percentage 91.95%
CDS Percentage 88.08%
Ka/Ks Ratio 0.08293 (Ka = 0.0414, Ks = 0.4993)

Gpcpd1 ENSRNOG00000021267 (Rat)

Gene Details

glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) (Gpcpd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028890, Rat)

Protein Percentage 87.89%
CDS Percentage 85.95%
Ka/Ks Ratio 0.14516 (Ka = 0.0731, Ks = 0.5033)

Genome Location

Sequence Coding sequence

Length: 2016 bp    Location: 6528864..6472621   Strand: -
>XM_004840787.1
ATGACGCCTTCTCAGGTTACCTTTGAAATAAGAGGATCTCTCTTACCAGGAGAAGTTTTTGCAATATGTGGAAGCTGTGATGCTTTGGGAAACTGGAATCCTCAGAATGCTGTGGCTCTTCTAGACAGTGAGACAGGTGACAGCATGTTATGGAAAGCAACCATTGCACTCACTAGGGGAATATCAGTTCTGTATCGCTACTACAAAGGATACTTTTTAGAACCAAAGACTATCGGTGGTCCATGTCAAGTCATAGTTCACAAGTGGGAGACTCATCTACAACCACGATCAATAACCCCTTTAGAAAGTGAAATTATTATTGATGATGGACAATTTGGAATCCACAATGGTGTTGAAACTCTGGATTGTGGATGGCTGACATGCCAGACGGAAATAAGATTACGTTTGCATTATTCTGAAAAACCTCCAGTCTCAATAACCAAGAAAAAATTCAAAAAATCTAGATTTAGAGTAAAGCTTACACTAGAGGGTCCCGAGGAAGACGATGATGATAGGGTATCTCCCACTGTTCTTCATAAAATGTCTAATACCCTGGAGATAGCCTTGATAAGTGACAACGAGTTCAAGTGCAGGCACTCACAGCCAGAGTGTGGGTATGGCCTACAGCCTGACCGTTGGACTGAGTACAGCATACAGACCATGGAGCCGGATAACCTAGAACTAATCTTTGATTTTTTTGAGGAAGATCTCAGTGAACATGTAGTTCAAGGTGACGCCCTTCCAGGACATGTGGGCACAGCATGCCTCTTATCATCCACCATTGCAGAGAGTGGGCGGAGTGCCGGGGTTCTTACCCTTCCTATCATGAGCAGGAATTCCAGGAAAACCATAGGCAAAGTTCGAGTTGACTTTATCATCATTAAGCCATTAACCGGATACAGTTGTGACATGAAATCTTCATTTTCCAAGTATTGGAAACCAAGAATACCACTGGATGTTGGACATCGAGGTGCAGGGAACTCGACAACAACTGCCCAGCTGGCTAAAGTTCAAGAAAATACTATTGCTTCTTTAAGAAACGCTGCTACTCATGGTGCAGCTTTTGTAGAATTTGATGTCCATCTTTCAAAGGACTTTGTGCCTGTGGTGTATCATGATCTTACCTGCTGTTTGACCATGAAAAAGAAATTTGATGCTGATCCAGTTGAATTATTTGAAATTCCAGTAAAGGAACTAACATTCGACCAACTACAGTTATTAAAGCTTTCTCATGTGACAGCACTAAAATCTAAAGATCGGAAAGAATCTGTAGTTGAGGGAGAAAATTCCTTTTCTGAAAACCAGCCATTTCCTTCTCTTAAGATGGTTTTAGAGTCTTTGCCAGAAGATGTAGGGTTTAATATAGAAATAAAGTGGATCTGCCAACAAAGGGATGGAATATGGGATGGTAACTTGTCAACATATTTTGACATGAATCTGTTTTTGGATATAATTCTAAAAAATGTTTTAGAAAACTCTGGAAAGAGAAGAATTGTGTTTTCTTCATTTGATGCAGATATTTGTACAATGGTTCGACAAAAGCAGAACAAATATCCCGTATTGTTTTTGACTCAAGGAAAATCTGATATTTACCCTGAACTTATGGACCTCAGATGTCGGACAACTCCCATTGCAATGAGCTTTGCACAGTTTGAAAATCTTCTGGGGATAAATGCACATACTGAAGACCTGCTCAGAAACCCATCCTATATTCAGGAGGCAAAAGCTAAGGGCCTTGTCATATTCTGTTGGGGCGATGACACCAATGATCCTGAAAACAGAAGGAAGTTGAAAGAATTTGGAGTTAATGGCCTAATTTATGATAGGATATATGATTGGATGCCTGAACAGCCAAATATATTCCAAGTGGAGCAGTTGGAACGCCTGAAGCAAGAATTGCCAGAGCTTAAGAGCTGCTTATGTCCCACTGTTAGCCACTTTGTCTCCTCATCCCTGTGCGGGGACCCTGACAACCATGTGGATGCCAATGGCATTGATAATGTGGAGAGCACTTAG

Related Sequences

XP_004840844.1 Protein

Gpcpd1 PREDICTED: glycerophosphocholine phosphodiesterase GPCPD1 isoform X2 [Heterocephalus glaber]

Length: 671 aa      View alignments
>XP_004840844.1
MTPSQVTFEIRGSLLPGEVFAICGSCDALGNWNPQNAVALLDSETGDSMLWKATIALTRGISVLYRYYKGYFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVETLDCGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGPEEDDDDRVSPTVLHKMSNTLEIALISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSEHVVQGDALPGHVGTACLLSSTIAESGRSAGVLTLPIMSRNSRKTIGKVRVDFIIIKPLTGYSCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAATHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLSHVTALKSKDRKESVVEGENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGIWDGNLSTYFDMNLFLDIILKNVLENSGKRRIVFSSFDADICTMVRQKQNKYPVLFLTQGKSDIYPELMDLRCRTTPIAMSFAQFENLLGINAHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRRKLKEFGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSHFVSSSLCGDPDNHVDANGIDNVEST