Details from NCBI annotation

Gene Symbol Siglec1
Gene Name sialic acid binding Ig-like lectin 1, sialoadhesin, transcript variant X3
Entrez Gene ID 101698560

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SIGLEC1 ENSCPOG00000007205 (Guinea pig)

Gene Details

sialic acid binding Ig-like lectin 1, sialoadhesin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006496, Guinea pig)

Protein Percentage 83.48%
CDS Percentage 86.73%
Ka/Ks Ratio 0.24259 (Ka = 0.0915, Ks = 0.3772)

SIGLEC1 ENSG00000088827 (Human)

Gene Details

sialic acid binding Ig-like lectin 1, sialoadhesin

External Links

Gene Match (Ensembl Protein ID: ENSP00000341141, Human)

Protein Percentage 76.31%
CDS Percentage 80.94%
Ka/Ks Ratio 0.22093 (Ka = 0.1392, Ks = 0.6302)

Siglec1 ENSMUSG00000027322 (Mouse)

Gene Details

sialic acid binding Ig-like lectin 1, sialoadhesin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028794, Mouse)

Protein Percentage 69.78%
CDS Percentage 76.17%
Ka/Ks Ratio 0.26188 (Ka = 0.197, Ks = 0.7521)

Siglec1 ENSRNOG00000021243 (Rat)

Gene Details

sialic acid binding Ig-like lectin 1, sialoadhesin (Siglec1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028855, Rat)

Protein Percentage 69.35%
CDS Percentage 75.45%
Ka/Ks Ratio 0.25704 (Ka = 0.204, Ks = 0.7937)

Genome Location

Sequence Coding sequence

Length: 5091 bp    Location: 4802866..4781347   Strand: -
>XM_004840731.1
ATGGGCTTCCTGCTCCAGCTGCTCATCTTCGCCTCCATCCTTCCCCCAGGCCAGCCCTCGTGGGGTGTCTCCAGTCCAGAAGGTGTGCAGGGTGTGAAGGGGTCTTGCCTGCTCATCCCCTGCACATTCAGCTTTCCTGCCAATGTGGAGGTGCCCAGTGGCATCACTGCCATCTGGTACTATGACTACTCAGGCAGTCGGCAAGTGGTGAGCCACTCAGCCAGCCCTGAGTTGGTGGAGTCTCGCTTCCGTGGCCGTGCTCAGCTGCTCGGAGACATGAACCACAGAACATGCAGCCTGCTGCTGAGTGACCTGCAGGCTGAGGACACCGGCGCTTACAACTTCCGCTTCGAGATCAGCGAGGGCAACCGCTGGTCAGACGTCAAAGGCACCTTGGTCACCGTGACAGAGGAGCCCCATGCGCCCACCATTACCTCCCCCAAAGAGCTTCGAGAGGGCACAGAGGTGACCTTCAACTGTTCCACAGCCTACGTGTGTCTGCAGAAGCCGGTCAGCCTGCAGTGGCAGGGCCAGGACCCGACTCGTTCTGTCACCTCCATTATCCAGAAACTCGACCCTACGGGTGGTGTCAGCCACATGAAGACCCTCCACATGACCCTGTCCTGGCAGGACCATGGACAGACCCTGCTCTGTCAGCTCTCAGTGGCTGACCACAGGAGTCAGGGCCAGGTCCACCTCCGTGTGCAGCATGCCCCCAAGAGTGTGGAGATCCTCCTCAGCCCCTCGGGGCAGAACATCCTTCCAGGGAATCTGGTCACACTCACTTGCCAAGTGAACAGCAGCTACCCTGTTGTAGACTCCGTGCAGTGGCTCAAGGACGGGGTGCCCCTCAAAGCCAATAGCCGCATGCTGCAGTTGTCCCAGGCGGCCTGGAATGATTCCGGTGTCTACACCTGCCAAGCTGGGAATACAGTGGGCTTTTTGGTCTCACCACCTATCAGCCTCCATGTCTTCATGGCCAAGGTTGAAGTGAGTCCATCAGGCCCCATCCTGGAGAACCAGACCGTGATGCTGTCCTGCGACACACCCAAGGAGGCACCCAGTGAGCTCAGCTACAGCTGGTACAAGAACCAGGTCCTGCTGGAGGATGCCCACACCCCCACCCTCTGGCTGCATGTGGCCACCAGGGCCGATACTGGCTTCTACTCCTGCGAGGTGCAGAACACCCAGGGCAGTGTGCGCTCTGGCCCCGTCAGTGTGGTGGTCAGCCACCCTCCCCTTGTCCCGGACCTGAGTGCCTTCCTAGAGACGCAGGCCAGGCTCGTGGGCATCCTCCAGTGCTCCGTGGTCAGTGAGCCTCTGGCCACACTGGTGCTGTCCCACGCGGACCTCATCATGGCCTCTAGCTCTGGAGAGAGGAACTACAGCCCCCGCTTCACCGTCTTCTCTGCTCCCAACTTCCTGCGCCTAGAGATTCGTGATCTGCAGGCAGCTGACAGTGGGGAATACAAGTGCACAGCTGCCAACTCCCTTGGAAATGCAACCTCCACCCTGGACTTCCATGCCAGCGCTGCCCGGCTCCTCATCAGCCCATCGGCCGAGGTGGTGGAAGGGCAAGCGGTGACTCTGAGCTGCAGGAGCGGCCTGAGCCCAGGGCCCGACACCCGCTTCTCCTGGTACCGGAACGGAGCACTGCTTCTCGAGGGACCCGGCAGCAACCTCCTGCTCCCCGCGGTCTCCAGCACTGATGCTGGCTCTTACCACTGCCGTGCCCAAGACGGACACAGCGCCAGCGGCCCCTCAGTGCCCACTGTCCTCACTGTGTTCTACCCCCCCCACCAGCTCACACTCACTGCCCAGCTGGAACTGCATGCCCCTGGTGCTGAGGCTGGGCGCCGTGGCCTCTTGCTGTGCCGTGTGGACAGCGACCCACCTGCCCATCTACGGCTGCTCCACAGAGAGCATGTAGTGGCCACATCATCAGAGGGTGGCTGCTGTACATGTCAAGGTTGCTCCCCACGCACAAAGGTCACCAACATGCCCAACCTGCTGCGGGTGGAGATTCACAACCCAGTGCTGGAGGATGAGGGCGTGTACCTGTGTGAGGCCAGTAACACCCTGGGCAACGCCTCTGCCTCGGCCACCTTCAACGCCCAGGCCACCGTCCTGGTCATCACCCCATCCAACTCGCTGCAGGAGGGCACAGAGGCCAACCTGACTTGCAGTGTGAGCCAGGAAGCCGCCAGCAGCCCTGCCAACTTCTCCTGGTTCCGGAATGGGGTGCTGTGGGCTCAGGGCCCCCGGGAGACTGTGAGGCTACCATCTGTGGCCAGGACCGACTCTGCCCTGTACACCTGTCACTTCATCACCAAAGCCAGCACCCAGCCCTCAGCGCCTGTGGTCCTGAGTGTGCTCTATCCCCCAGACCCTCCAAAGCTGTCAGCCCTCCTGGACATGGGCCAGGGCCACACAGCCATGTTCATCTGCACTGTGGACAGCCATCCCCTGGCTCAGCTGTCCCTGTTCCATGGGGAGCAACTCCTGGCCACCAGCCATGGACCCCAGCTCTCATCCCATGGTAGGCTCCAGACCAAGGCCACCACCAACTCCCTGCAGCTGGAGGTCCGAGAACTAGCCCTTGGGGACTCTGGTCAGTACCACTGCGAGGCTATAAATGTTCTGGGATCAGCCAACACTTCACTCTTTTTCCACGTCCGAGGAGCCTGGGTCCAGGTCTCACCATCCCCTGAGCTCCAGGCAGGCCAGGCCGTGGTCCTGCACTGTCAGGTGCCCACGGGGGTCCCCGAGGAGGCCTCGTACCTCTGGTTTCGGGATGGCCAGGCCCTCCACGAGTCAACCTCAGCCACGCTGTGCATTGCAGCCATAACTCCGAAGCAAGCTGGTGCCTACCATTGCCAAGTTCAGGCCTCAGGCTCAGCCACCAGCCTGGCTGCCCCCATCAGCCTGCATGTGTCCTATGCCCCACAGCAGGCCACACTCACCACCCTGATGGACATGGGCCCAGGACGACTGGGCCTCATCCTGTGCCATGTGGACAGTGACCCTCCAGCCCAGCTGCGGCTGCTCCACGGAGACCACCTGGTGGCCTCTACCCTGCAAGCTGTGGGGGAAGATGCAGGCAGCGATGCCCGGCTACGGGTGTCCATGACCCCCAACACACTTCGGCTGGAGATCCACAACACAGTGCTGGAAGACGAGGGCGTCTACACCTGTGAGGCCACCAACACCCTGGGGCAGGCCTCAGCTTCAGCTGACTTTGATGCCCAGGCTGTGAGTGTGCAGGTGTGGCCCAAAGCCACCGTGAAGGAGGGGCAGCAAGTGAACCTTACCTGCCTCGTGTGGGCCACCCACCTGGCTCAGCTCACCTACATATGGTATCAGGACGGGCAGAAACGCCCAGGTGCCCGCTCCATCTCCCTGCCCAACGTCACACTTATTGATGCTGCCTCCTATCGCTGTAGTGTGGGGTCCCCTGGACAGGCACCCCGCCTCTCCACACCTGTCACCCTGGATGTCCTCTATGCTCCCCGCAGCCTACGCCTGACCTACCTCTTGGACAGCCATGGTGGCGGGCAGCTGGCCTTGGTGCTGTGCACAGTGGACAGCCGTCCACCTGCCCAGATGGCCCTCAGCCGCGCTGGCCGCCTCCTGGCCTCCTCATCCACAGCCTCTGTCCCCAACACCCTGCGCCTGGAGCTGCAGGAGCCGCGGCCCAGTGACGAAGGGCTGTACTGCTGCTCAGCCCACAGCCCTCTGGGCCAGACCAACACTTCCCTGGAGCTGCGGCTGGAGGGTGTACGGGTGACACTGGCTCCATCAGCTGCTATCCCTGAGGGAACCTCCGTCACAGTGACCTGTGAGGACCCTGCTGCACGCCCACCCATACTTTATTCCTGGTACCACAATGGCCGTTGGCTGCAGGAAGGGACAGCTGCCTCACTTAAGTTCCTGAGGGCCACACGGGCTCACACGGGTGCCTACTCCTGTCAGGTCCATGATGCCCAGGGCACACGCACCTCCCGGCTGGCCTCCTTGCAAGTCCTCTATCCTCCCCGAGATGCTGTCCTTTCTTCCTTCCGCGACTCCAGAACCAGCCCCATGGCCATGGTACAGTGCACTGTGGACAGTGAGCCACCTGCTGAGCTAGCTCTGTCCTACAATGGCACAGTGCTAGCCACCAGCCATGGACTCCATGACTCAGTATCTGAGACTGGTGACATCCAGGTGGCCCGCAATGCCCTGCGGCTGCAGGTGCCAGATATGCCTGCAGATGATGACAACACCTATGTTTGCATGGCCCAAAATTTGCTGGGCTCAGTCAGTACCACCTGGAAGCTACAGGTGGAGGGTGTGCGCGTGGTGGCTGAGCCAGGCCTGGAGGTGCCTGAGGGCACCGCGCTGAACCTGAGCTGCCACCTCCCTCATTCTCCTGGGCTCATGGGCAACTCCACCTTCACATGGTTCCAGAACGGCCGGCCACTGCACACACATCCCATGCCCACTCTGACCTTCAGCCATGTGGGCCGTGCCCAGTCTGGGCTGTACCACTGCCAAGCAGAGCTGCCCTCTGGAGCCTCGGCCTCTGCTCCAGTCATGCTCCGAGTGCTCTACCCGCCCACGACGCCCACCATGACAGTCTTTGTGGAGCCTAAGGGTGGCCTCCGGGGGATCCTGGACTGCCGAGTGGACAGCCAGCCCCTGGCCAGCCTGACCCTCCACCTCGGGAGCAGACTGGTGGCCTCCAGCCAGCTGCAGGGTGCTCCCACAGGGTCGCACATCCATGTCTCAGCCTCCCCTAATGCCCTGAGGGTGGACATGGAGGCTCTAAGGCCCAGAGACCAGGGGGAATATGTGTGTTCTGCCTCCAATGGCCTGGGCTCTGCTTCTGCCTCTGCCTACTTTGGGGTTTCAGCCCTGCACCAGCTGCATTTGTTCCAGTGGCTCCTTTGGGTGCTGGGACTACTGGCTGCCTTCCTGTGCTTGCTGTTAGGCCTGGGGGCCTACTATGTCTGGAGGAAGCGTTCTCAAAATTTGAACACAGGCAGGAATTTGTTGGAGATGGACTTCCCCAATGGACACCATGCAGGAGGAGAAGGAGGAGGAGACTGA

Related Sequences

XP_004840788.1 Protein

Siglec1 PREDICTED: sialoadhesin isoform X3 [Heterocephalus glaber]

Length: 1696 aa      View alignments
>XP_004840788.1
MGFLLQLLIFASILPPGQPSWGVSSPEGVQGVKGSCLLIPCTFSFPANVEVPSGITAIWYYDYSGSRQVVSHSASPELVESRFRGRAQLLGDMNHRTCSLLLSDLQAEDTGAYNFRFEISEGNRWSDVKGTLVTVTEEPHAPTITSPKELREGTEVTFNCSTAYVCLQKPVSLQWQGQDPTRSVTSIIQKLDPTGGVSHMKTLHMTLSWQDHGQTLLCQLSVADHRSQGQVHLRVQHAPKSVEILLSPSGQNILPGNLVTLTCQVNSSYPVVDSVQWLKDGVPLKANSRMLQLSQAAWNDSGVYTCQAGNTVGFLVSPPISLHVFMAKVEVSPSGPILENQTVMLSCDTPKEAPSELSYSWYKNQVLLEDAHTPTLWLHVATRADTGFYSCEVQNTQGSVRSGPVSVVVSHPPLVPDLSAFLETQARLVGILQCSVVSEPLATLVLSHADLIMASSSGERNYSPRFTVFSAPNFLRLEIRDLQAADSGEYKCTAANSLGNATSTLDFHASAARLLISPSAEVVEGQAVTLSCRSGLSPGPDTRFSWYRNGALLLEGPGSNLLLPAVSSTDAGSYHCRAQDGHSASGPSVPTVLTVFYPPHQLTLTAQLELHAPGAEAGRRGLLLCRVDSDPPAHLRLLHREHVVATSSEGGCCTCQGCSPRTKVTNMPNLLRVEIHNPVLEDEGVYLCEASNTLGNASASATFNAQATVLVITPSNSLQEGTEANLTCSVSQEAASSPANFSWFRNGVLWAQGPRETVRLPSVARTDSALYTCHFITKASTQPSAPVVLSVLYPPDPPKLSALLDMGQGHTAMFICTVDSHPLAQLSLFHGEQLLATSHGPQLSSHGRLQTKATTNSLQLEVRELALGDSGQYHCEAINVLGSANTSLFFHVRGAWVQVSPSPELQAGQAVVLHCQVPTGVPEEASYLWFRDGQALHESTSATLCIAAITPKQAGAYHCQVQASGSATSLAAPISLHVSYAPQQATLTTLMDMGPGRLGLILCHVDSDPPAQLRLLHGDHLVASTLQAVGEDAGSDARLRVSMTPNTLRLEIHNTVLEDEGVYTCEATNTLGQASASADFDAQAVSVQVWPKATVKEGQQVNLTCLVWATHLAQLTYIWYQDGQKRPGARSISLPNVTLIDAASYRCSVGSPGQAPRLSTPVTLDVLYAPRSLRLTYLLDSHGGGQLALVLCTVDSRPPAQMALSRAGRLLASSSTASVPNTLRLELQEPRPSDEGLYCCSAHSPLGQTNTSLELRLEGVRVTLAPSAAIPEGTSVTVTCEDPAARPPILYSWYHNGRWLQEGTAASLKFLRATRAHTGAYSCQVHDAQGTRTSRLASLQVLYPPRDAVLSSFRDSRTSPMAMVQCTVDSEPPAELALSYNGTVLATSHGLHDSVSETGDIQVARNALRLQVPDMPADDDNTYVCMAQNLLGSVSTTWKLQVEGVRVVAEPGLEVPEGTALNLSCHLPHSPGLMGNSTFTWFQNGRPLHTHPMPTLTFSHVGRAQSGLYHCQAELPSGASASAPVMLRVLYPPTTPTMTVFVEPKGGLRGILDCRVDSQPLASLTLHLGSRLVASSQLQGAPTGSHIHVSASPNALRVDMEALRPRDQGEYVCSASNGLGSASASAYFGVSALHQLHLFQWLLWVLGLLAAFLCLLLGLGAYYVWRKRSQNLNTGRNLLEMDFPNGHHAGGEGGGD