Details from NCBI annotation

Gene Symbol Sqstm1
Gene Name sequestosome 1, transcript variant X1
Entrez Gene ID 101724587

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SQSTM1 ENSCPOG00000026534 (Guinea pig)

Gene Details

sequestosome 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018515, Guinea pig)

Protein Percentage 83.37%
CDS Percentage 83.91%
Ka/Ks Ratio 0.1344 (Ka = 0.0926, Ks = 0.6892)

SQSTM1 ENSG00000161011 (Human)

Gene Details

sequestosome 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000374455, Human)

Protein Percentage 86.47%
CDS Percentage 85.32%
Ka/Ks Ratio 0.09418 (Ka = 0.0656, Ks = 0.6968)

Sqstm1 ENSMUSG00000015837 (Mouse)

Gene Details

sequestosome 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099835, Mouse)

Protein Percentage 85.09%
CDS Percentage 83.03%
Ka/Ks Ratio 0.0977 (Ka = 0.0782, Ks = 0.8003)

SQSTM1 ENSRNOG00000003147 (Rat)

Gene Details

sequestosome 1 (Sqstm1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056021, Rat)

Protein Percentage 85.91%
CDS Percentage 83.22%
Ka/Ks Ratio 0.0877 (Ka = 0.0728, Ks = 0.8304)

Genome Location

Sequence Coding sequence

Length: 1314 bp    Location: 42691967..42700916   Strand: +
>XM_004836730.1
ATGGCGTCGCTCACCGTGAAGGCCTACCTACTGGGCAAGGAGGAGGCGGCGCGCGAGATCCGCCGCTTCAGCTTCGGCTTCAGCCCCGAGTCGCAGGCGGAGGCCGAGGAGGCGGCGGCGGCCCCCGGGCCCTGCGAGCGGCTGCTGAGGCGGGTGGCCGCCCTGTTCCCGGGCCTGCGGCCCGGCGGCTTCCAGGCGCACTACCGCGATGAGGACGGGGACTTGGTGGCTTTTTCCAGTGATGAGGAGCTGATGATGGCCATGTCTTATGTGAAGGACGACATCTTCCGCATCTACATTAAAGAGAAGAAAGAGTACCGGAGGGAGCACCGCCCCCACTGTGCGCAGGAAGTGCCTCACCCCATGGTACACCCCAACGTGATCTGCGACGGCTGTGACGGGCCTGTGGTGGGAACTCGGTACAAGTGCAGTGTGTGCCCCAACTACGACCTGTGTGGCGCCTGCGAGGGGAAAGGCATTCACAGGGAGCACAACAAGCTCCCGCTGGCCAGCCCCCTGGAGCACTTTGCTGAGGGCTTCGCTCACAGCCGCTGGTTCCGGAAGCTGAAACATGGGCATTGCCGGTGGCCTGGCTGGGAGATGGGCCCACCAGGCCACTGGAGCCCACGTCCTCGAGTGGGAGATGCCCGCCCCAGGGCAGAGTCAGCTTCTGGCCCATCAGAGGATCCCAGTGTAAATTTCCTGAAGAACGTAGGGGAGAGTGTGGCAGCTGCCCTGAGCCCTCTGGGCATTGAAGTTGACATTGACGTGGAGCACGGAGGGAAGAGGAGCCGCCTGACATCCATCTCCCCGGAGAGCTCCAGCACAGATGACAAGGGCAGCTCCCAGCCAAGCAGCTGCTCTTCTGAACCAAGCAAGCCAGAGGGCAGTGGCAAGGGCATAGCGCAGTCTCTGGCAGAGCAGATGAGAAAGATCGCCCTGGAGCCCACAGGGCAGCCCGAGGAGCAGATGGAGTCTGACAACTGTTCGGGAGGAGACGAGGACTGGACTCATCTGTCCTCAAAGGAAGTGGACCCCTCCACCGGGGAGCTTCAGTCCCTCCAGATGCCAGAGTCGGAAGAGCTGAGCTCTCTGGACCCTTCCCAGGAGGGGCCCACAGGGCTGAAGGAGGCTGCCTTGTACCCGCACCTCCCACCAGAGGCTGACCCCCGGCTGATCGAGTCACTGTCCCAGATGCTGTCCATGGGCTTCTCTGATGAAGGCGGCTGGCTCACCCGCCTCCTGCAGACCAAGAACTACGACATTGGGGCTGCCCTGGACACCATCCAGTACTCCAAGCACCCGCCACTGTGA

Related Sequences

XP_004836787.1 Protein

Sqstm1 PREDICTED: sequestosome-1 isoform X1 [Heterocephalus glaber]

Length: 437 aa      View alignments
>XP_004836787.1
MASLTVKAYLLGKEEAAREIRRFSFGFSPESQAEAEEAAAAPGPCERLLRRVAALFPGLRPGGFQAHYRDEDGDLVAFSSDEELMMAMSYVKDDIFRIYIKEKKEYRREHRPHCAQEVPHPMVHPNVICDGCDGPVVGTRYKCSVCPNYDLCGACEGKGIHREHNKLPLASPLEHFAEGFAHSRWFRKLKHGHCRWPGWEMGPPGHWSPRPRVGDARPRAESASGPSEDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTSISPESSSTDDKGSSQPSSCSSEPSKPEGSGKGIAQSLAEQMRKIALEPTGQPEEQMESDNCSGGDEDWTHLSSKEVDPSTGELQSLQMPESEELSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSKHPPL