Details from NCBI annotation

Gene Symbol Rnf13
Gene Name ring finger protein 13, transcript variant X2
Entrez Gene ID 101725061

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF13 ENSCPOG00000000517 (Guinea pig)

Gene Details

ring finger protein 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000454, Guinea pig)

Protein Percentage 97.38%
CDS Percentage 96.7%
Ka/Ks Ratio 0.10433 (Ka = 0.0117, Ks = 0.1121)

RNF13 ENSG00000082996 (Human)

Gene Details

ring finger protein 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000341361, Human)

Protein Percentage 96.59%
CDS Percentage 93.88%
Ka/Ks Ratio 0.07852 (Ka = 0.0177, Ks = 0.2257)

Rnf13 ENSMUSG00000036503 (Mouse)

Gene Details

ring finger protein 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049331, Mouse)

Protein Percentage 93.7%
CDS Percentage 89.68%
Ka/Ks Ratio 0.08027 (Ka = 0.0329, Ks = 0.4097)

Rnf13 ENSRNOG00000029209 (Rat)

Gene Details

ring finger protein 13 (Rnf13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060441, Rat)

Protein Percentage 93.16%
CDS Percentage 89.65%
Ka/Ks Ratio 0.08758 (Ka = 0.0348, Ks = 0.397)

Genome Location

Sequence Coding sequence

Length: 1146 bp    Location: 27156076..27303802   Strand: +
>XM_004834441.1
ATGCTGCTCTCCATAGGGATGCTTATGCTGTCGGCCACACAAGTCTACACCATCTTGACTGTCCAGCTCTTTGCATTCTTAAACTTACTGCCTGTAGAAGCAGACATTTTAGCATATAATTTTGAAAATGCATCTCAGACATTTGATGATCTTCCAGCAAGATTTGGTTATAGACTTCCAGCTGAAGGTTTAAAGGGTTTTTTGATTAATTCAAAACCAGAGAATGCTTGTGAACCCATAGTGCCTCCACCAGTAAAAGACAATTCATCTGGCACTTTCATCGTGTTAATTAGAAGACTTGATTGTAATTTTGATATAAAGGTTTTAAATGCACAGAGAGCCGGATACAAAGCCGCTATTGTTCACAATGTTGATTCTGACGACCTCATTAGCATGGGATCCAACGACATTGATGTGTTAAAGAAAATTGACATTCCATCTGTCTTTATTGGTGAATCATCAGCTAATTCCCTGAAAGATGAATTCACATATGAAAAAGGGGGCCACATTATCTTAGTTCCAGAATTTAATCTTCCTCTGGAATACTATCTAATCCCCTTCCTCATTATAGTGGGCATCTGTCTCATCCTAATAGTCATTTTTATGATCACAAAATTTGTCCAGGACAGACACAGAGCTAGAAGAAATAGACTTGGTAAAGATCAACTTAAGAAACTCCCAGTACATAAATTTAAGAAAGGAGATGAGTATGATGTATGTGCCATTTGTTTGGATGAATATGAAGATGGAGACAAACTCAGAATCCTTCCCTGTTCCCATGCTTATCACTGCAAGTGTGTAGACCCCTGGCTAACTAAAACCAAGAAAACCTGTCCAGTCTGCAAGCAGAAAGTTGTTCCTTCTCAAGGTGATTCTGACTCTGACACAGACAGTAGTCAAGAAGAAAACGAAGTGTCAGAACACACCCCTTTGCTTAGACCTTTAGCCTCTGTCAGTGCCCAGTCATTTGGGGCTTTGTCAGAGTCCCACTCACATCAGAACATGACAGAATCTTCAGACTTTGAGGACGATGACAATGAAGATACTGACAGCAGTGAGGCAGAAAATGAATTGAATGAACACAGTGTTGTGGTCCAGTTGCAGCCTAATGGTGAGCAGGACTGCAACATAGCAAATACCGTGTGA

Related Sequences

XP_004834498.1 Protein

Rnf13 PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform X2 [Heterocephalus glaber]

Length: 381 aa      View alignments
>XP_004834498.1
MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIDVLKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPEFNLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLGKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVSEHTPLLRPLASVSAQSFGALSESHSHQNMTESSDFEDDDNEDTDSSEAENELNEHSVVVQLQPNGEQDCNIANTV