Details from NCBI annotation

Gene Symbol Rnf123
Gene Name ring finger protein 123, transcript variant X2
Entrez Gene ID 101717442

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF123 ENSCPOG00000011432 (Guinea pig)

Gene Details

ring finger protein 123

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010277, Guinea pig)

Protein Percentage 95.89%
CDS Percentage 92.49%
Ka/Ks Ratio 0.06855 (Ka = 0.0199, Ks = 0.2903)

RNF123 ENSG00000164068 (Human)

Gene Details

ring finger protein 123

External Links

Gene Match (Ensembl Protein ID: ENSP00000328287, Human)

Protein Percentage 93.53%
CDS Percentage 90.54%
Ka/Ks Ratio 0.08003 (Ka = 0.0314, Ks = 0.3919)

Rnf123 ENSMUSG00000041528 (Mouse)

Gene Details

ring finger protein 123

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000124548, Mouse)

Protein Percentage 92.92%
CDS Percentage 88.69%
Ka/Ks Ratio 0.07512 (Ka = 0.0361, Ks = 0.4805)

Rnf123 ENSRNOG00000033378 (Rat)

Gene Details

ring finger protein 123 (Rnf123), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049507, Rat)

Protein Percentage 92.23%
CDS Percentage 87.86%
Ka/Ks Ratio 0.0743 (Ka = 0.039, Ks = 0.5251)

Genome Location

Sequence Coding sequence

Length: 3945 bp    Location: 3617449..3645797   Strand: +
>XM_004834051.1
ATGGCGTCTAAAGGGGCTGGCATGTCTTTCTCCCGAAAGAGCTATAAGCTGACCTCAGATGCTGAGAAATCCAGGGTCACAGGCATTGTGCATGAGAAGCTGCTGAATGACTACTTGCACTGCATCTTTTCCTCTACTGACCATGTGCCCCCTGCAGCCACCAGCAGGAAATTCCTGAACTTCCAGAACCTGCCAGAGCGTCTGGACCAGCTGCTACAGGTGGACAGTGAAGATGAGGAAAGCCAGGGACAGGTTGAAGGGCGGCTTGGCCCATCCACAGTGGTACTAGACCACACAGGAGGCTTTGAGGGGCTTCTCCTGGTGGATGATGACCTCCTGGAGGTGATTGGACACAGCAACTTTGGGACTATCCGCTCTACCACATGTGTATACAAAGGGAAGTGGCTCTACGAGGTGCTCATCTCCTCCCAGGGGCTCATGCAGATTGGTTGGTGCACCATCAGCTGCCGCTTCAATCATGAGGAAGGGGTTGGAGACACACCCAACTCCTATGCCTATGACGGAAACCGGGTGCGCAAGTGGAATGTGACCACAACAAATTATGGCAAGGCCTGGGCAGCGGGGGACATTGTGAGCTGTCTGATTGACCTGGACGCTGGTACTCTCTCCTTTTGCCTGAATGGTGTGTCACTGGGCACTGCCTTTGAGAACCTGTCCAAGGGCCAGGGCATGGCCTACTTCCCAGCCATCAGCCTGTCTTTTAAGGAGTCCGTGGCCTTCAACTTTGGCAGCCGTCCTCTGCGCTACCCAATGGCAGGCTTCCGGCCTCTGCAGGACCCACCTGGTGCTGACCTGGTGCGGGCACAGAGGTTGCTGGGCTGTTTCCGGGCAGTGCTCAGTGTGGAGCTGGACCCTGTGGAAGGGCGGCTGGTGGAGAAGGAGAGCTCTGAGTGGCAGTTGCAAGGGCAGCCCACTGTCCTCCTCACTCTGGCCCACATCTTCCATCGTTTTGCACCACTGCTGCACAAGGTATACCTGGTAGAGGCTGTGCTCATAAACTTCCTGCTGGGCATTGTGGAGAAGGACACACCTGCACAGGCACAGTCCGTGGTGCACCAGGTCTTGGACCTCTTTTGGCTCTTCATGGAGGACTATGAGGTACAGGATTGCCTCAAGCAGTTGATGATGTCTCTGCTGCGCTTATACCGGTTTTCGCCAATCGTTCCAGACCTGAGCCTGCAGATCCACTATCTGAGACTCACTATCTCCATCCTGAGGCATGAGAAGTCCCGCAAATTTCTGCTTAGCAATGTCCTCTTCGACATGCTGCGGTCTGTCATCTTCTTCTACATCAAGAGCCCCCTGCGTGTGGAGGAGGCCGGGCTGCAGGAGCTCATTCCCACCACCTGGTGGCCCTGCTGCTCCAGCAGGGAGGCCAGAGAGAATAAGGAGGTGAAGGAGGAGACGTCAGAGGAGAGGCTCCGGCGTCGAGCCTATGAGCGGGGCTGCCAGAGGCTCAAGAAGCGCATTGAAGTGGTAGAAGAACTTCAGGTCCAAATCCTGAAGCTGCTGTTGGACAATAAAGATGACAGTGGGGGTGAAGCTTCTAGGTATATCTTCCTGTCCAAGTTCCGGAAGTTTCTGCAAGAGAATGCCAGTGGCCGGGGGAATATGCCCATGCTCTGCCCCCCTGAGTACATGGTCTGCTTTTTGCACCGGCTCATCTCTGCCCTGCGCTACTATTGGGATGAGTACAAGGCTTCCAACCCCCGTGCCTGCTTCAGTGAGGAGGCTTACATCCCACCCCAGGTCTTCTATAATGGCAAAGTGGACTACTTCGACCTTCAGCGCCTTGGGGGGCTCCTCTCACACCTTCGGAAGACCCTCAGAGATGACCTTGCTGCCAAAGCTAACATTGTGATTGACCCACTGGAGCTGCAGGCAGCCACGATGGATGACCTGGATGAGGATGAGGAGCCAGCCCCGTCTGCAGCCCAGCGCCCCATGCAAGCCCTGGCCATGGGAGGGGCACTGCCCCTGCCCCGGCCAGGCTGGCTTAGTTCACCAACTCTGGGCCGAGCCAACCGCTTCCTCAGCACAGCAGCTGTGAGCCTCATGACCCCACGGCGGCCTCTGAGCACCTCGGAGAAAGTGAAGGTCCGAACACTGAGCGTGGAACAAAGGACTCGTGAGGATATTGAGGGCAGCCATTGGAACGAGGGCCTGCTGCTGGGGCGGCCTCCTGAGGAACCCGAGCAGCCTGTCACCGAGAACTCCCTGCTGGAAGTCCTAGATGGGGCCATCATGATGTATAACCTCAGCGTCCACCAGCAGCTGGGCAAGATGGTGGGTGTGTCCGACGATGTCAACGAGTATGCGATGGCTCTGAGGGACACAGAAGACAAGATCCGCAGGTGTCCCAAGCGGAGGAAGGATATCCTCACAGAATTGACCAAGAGCCAGAAAGTTTTCTCGGAAAAGCTGGATCACCTGAGCCGTCGTCTTGCCTGGGTCCACGCCACTGTCTACTCCCAGGAGAAGATGCTGGACATCTACTGGCTGCTGCGCATCTGCCTGCGGACCATCGAGCATGGGGACCGTACCGGCTCCCTCTTCGCCTTCATGCCTGAGTTCTACCTGAATGTTGCCATCAACAGCTACAGTGCTCTCAAGAATTATTTTGGCCCTGTGCACAGCATGGAGGAGCTCCCAGGCTACGAGGAGACCCTGACCCGCCTGGCTGCCATCCTTGCCAAACACTTTGCCGACACACGCATTGTAGGCACTGACATTCGAGACTCACTCATGCAGGCCCTGGCTAGCTACGTGTGTTACCCACACTCCCTACGGGCTGTGGAGCGGATCCCCAAGGAGCAGCGTGTTGCCATGGTGAGGAATCTCCTGGCGCCCTATGAGCAGCGGCCCTGGGCCCAGACCAACTGGATCCTAGTGCGGCTCTGGAGGGGCTGTGGGTTTGGATACCGCTACACACGGCTGCCACATCTGCTGAAAACCAAACCTGATGATGCCAATTTGCCCAGCCTCCAGAAGCCTTGTCCCTCCACCCTGCTGCAGCAGCACATGGCAGACCTGCTGCGGCAGGGTCCTGATGTGGCACCTAGCTTCCTCAACAGTGTCCTGAATCAGCTCAACTGGGCCTTCTCTGAGTTCATCGGCATGATCCAGGAGATTCAGCAGGCTGCTGAGCGCCTGGAGCGAAACTTTGTAGATAGCAGGCAGCTCAAGGTGTGTGCCACCTGCTTTGACCTGTCAGTCAGCCTGCTGCGTGTCCTGGAAATGACCATCACGCTGGTGCCTGAGATATTCCTCGACTGGGCCTGGCCTACCTCTGAGATGCTGCTGCGGCGTCTCGCACAGCTGCTGAACCAGGTGCTGAACCGGGTGACAGCTGAAAGGAACCTGTTTGACCGTGTGGTTACCCTGCGGCTGCCTGGTCTGGAGAGCGTGGACCACTACCCCATCCTGGTGGCAGTAACGGGCATCCTGGTACGGCTCCTGGTGCATGGTCCAGCCTCAGAGACAGAGAGAGCCACGTCAGTGCTCCTGGCTGATCCCTGCTTCCAGCTTAGATCCATATGCTATCTCCTGGGGCAGCCAGAGCCTCCAGCACCTGGTACTGCCCTGCCTGCCCCAGACCGGAAGCGCTTCTCTCTGCAGAGCTACACAGATTATATCAATGCTGAGGAGCTGGCCCAAGTGGAGCGGATGCTGGCTCATCTGACCTCTGCATCTGCTCAGGCAGCAGCTGCATCCCTGCCCACCAGCGAGGAGGACCTCTGCCCAATCTGCTACGCCCACCCCATCTCTGCTGTGTTCCAGCCCTGTGGTCACAAATCTTGCAAAGCCTGCATCAACCAGCACCTGATGAACAACAAGGATTGCTTCTTCTGCAAAGCCACCGTTGTGTCTGTAGAGGACTGGGACAAGGTAGCAAATACAGGCACCACCTCCTCGGCTCCCTAG

Related Sequences

XP_004834108.1 Protein

Rnf123 PREDICTED: E3 ubiquitin-protein ligase RNF123 isoform X2 [Heterocephalus glaber]

Length: 1314 aa      View alignments
>XP_004834108.1
MASKGAGMSFSRKSYKLTSDAEKSRVTGIVHEKLLNDYLHCIFSSTDHVPPAATSRKFLNFQNLPERLDQLLQVDSEDEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLEVIGHSNFGTIRSTTCVYKGKWLYEVLISSQGLMQIGWCTISCRFNHEEGVGDTPNSYAYDGNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDAGTLSFCLNGVSLGTAFENLSKGQGMAYFPAISLSFKESVAFNFGSRPLRYPMAGFRPLQDPPGADLVRAQRLLGCFRAVLSVELDPVEGRLVEKESSEWQLQGQPTVLLTLAHIFHRFAPLLHKVYLVEAVLINFLLGIVEKDTPAQAQSVVHQVLDLFWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLSLQIHYLRLTISILRHEKSRKFLLSNVLFDMLRSVIFFYIKSPLRVEEAGLQELIPTTWWPCCSSREARENKEVKEETSEERLRRRAYERGCQRLKKRIEVVEELQVQILKLLLDNKDDSGGEASRYIFLSKFRKFLQENASGRGNMPMLCPPEYMVCFLHRLISALRYYWDEYKASNPRACFSEEAYIPPQVFYNGKVDYFDLQRLGGLLSHLRKTLRDDLAAKANIVIDPLELQAATMDDLDEDEEPAPSAAQRPMQALAMGGALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRPLSTSEKVKVRTLSVEQRTREDIEGSHWNEGLLLGRPPEEPEQPVTENSLLEVLDGAIMMYNLSVHQQLGKMVGVSDDVNEYAMALRDTEDKIRRCPKRRKDILTELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYWLLRICLRTIEHGDRTGSLFAFMPEFYLNVAINSYSALKNYFGPVHSMEELPGYEETLTRLAAILAKHFADTRIVGTDIRDSLMQALASYVCYPHSLRAVERIPKEQRVAMVRNLLAPYEQRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPDDANLPSLQKPCPSTLLQQHMADLLRQGPDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSLLRVLEMTITLVPEIFLDWAWPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGLESVDHYPILVAVTGILVRLLVHGPASETERATSVLLADPCFQLRSICYLLGQPEPPAPGTALPAPDRKRFSLQSYTDYINAEELAQVERMLAHLTSASAQAAAASLPTSEEDLCPICYAHPISAVFQPCGHKSCKACINQHLMNNKDCFFCKATVVSVEDWDKVANTGTTSSAP